PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 105183 | ||||||||
Common Name | MICPUN_105183 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas
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Family | bZIP | ||||||||
Protein Properties | Length: 236aa MW: 24765.4 Da PI: 8.606 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 80 | 2.8e-25 | 113 | 175 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr+rrkq+NRe+ArrsR+RK+ae+eeL +v++L++eN +L+ ele+lk+++ +l++++ 105183 113 ERELKRQRRKQSNRESARRSRLRKQAECEELGGRVDALSTENVTLRAELERLKETCGALETDN 175 89*******************************************************999887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.9E-18 | 109 | 172 | No hit | No description |
Pfam | PF00170 | 1.6E-22 | 113 | 175 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 1.4E-22 | 113 | 177 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 12.243 | 115 | 178 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.25E-12 | 116 | 171 | No hit | No description |
CDD | cd14702 | 3.08E-17 | 118 | 168 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 120 | 135 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0010310 | Biological Process | regulation of hydrogen peroxide metabolic process | ||||
GO:0010629 | Biological Process | negative regulation of gene expression | ||||
GO:0090342 | Biological Process | regulation of cell aging | ||||
GO:0005737 | Cellular Component | cytoplasm | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence Send to blast |
MQAPAQSQAA YSYGQQQMAP NPYAMWPQAM SNPYGGASQF MYPGYMGAYG AGAGAEGKDA 60 TANGDAAAYT NGAAAMWHEQ AAAAKAAAGG GAGGGGSNGV GGGGSNGEVW MDERELKRQR 120 RKQSNRESAR RSRLRKQAEC EELGGRVDAL STENVTLRAE LERLKETCGA LETDNTVLTD 180 KLKELKGPDA VEAVRKEVAK KKDEAKGEED GKKKENGKTG ELTNGKRKAE VKAEA* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 129 | 135 | RRSRLRK |
2 | 129 | 136 | RRSRLRKQ |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00039 | PBM | Transfer from AT4G36730 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | - | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | CP001323 | 0.0 | CP001323.1 Micromonas sp. RCC299 chromosome 2, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002499474.1 | 1e-168 | predicted protein | ||||
TrEMBL | C1E001 | 1e-166 | C1E001_MICCC; Uncharacterized protein | ||||
STRING | XP_002499474.1 | 1e-167 | (Micromonas sp. RCC299) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Chlorophytae | OGCP4426 | 9 | 11 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36730.2 | 3e-25 | G-box binding factor 1 |
Link Out ? help Back to Top | |
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Phytozome | 105183 |
Entrez Gene | 8241151 |
Publications ? help Back to Top | |||
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