PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 146852 | ||||||||
Common Name | MICPUCDRAFT_9929 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas; Micromonas pusilla
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Family | bZIP | ||||||||
Protein Properties | Length: 63aa MW: 7109.98 Da PI: 10.3105 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 68 | 1.5e-21 | 2 | 61 | 1 | 60 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 e+elkr+rrkq+NRe+ArrsR+RK+ae+e L +v L +eN +Lk e+ +l ++++l 146852 2 ERELKRQRRKQSNRESARRSRLRKQAECEALGSRVGGLVEENASLKAEVARLLANCEALS 61 89******************************************************9986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 3.7E-17 | 1 | 60 | No hit | No description |
SMART | SM00338 | 6.2E-13 | 2 | 62 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 7.1E-20 | 2 | 60 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.438 | 4 | 63 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.0E-12 | 5 | 60 | No hit | No description |
CDD | cd14702 | 3.20E-9 | 7 | 57 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 9 | 24 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 63 aa Download sequence Send to blast |
DERELKRQRR KQSNRESARR SRLRKQAECE ALGSRVGGLV EENASLKAEV ARLLANCEAL 60 SAD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 18 | 24 | RRSRLRK |
2 | 18 | 25 | RRSRLRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003060829.1 | 8e-35 | predicted protein, partial | ||||
Swissprot | Q501B2 | 4e-20 | BZP16_ARATH; bZIP transcription factor 16 | ||||
TrEMBL | C1MYH1 | 2e-33 | C1MYH1_MICPC; Predicted protein (Fragment) | ||||
STRING | XP_003060829.1 | 3e-34 | (Micromonas pusilla) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Chlorophytae | OGCP4426 | 9 | 11 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35530.1 | 2e-22 | basic region/leucine zipper transcription factor 16 |
Link Out ? help Back to Top | |
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Phytozome | 146852 |
Entrez Gene | 9686266 |
Publications ? help Back to Top | |||
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