PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0091s0063.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family NAC
Protein Properties Length: 344aa    MW: 39586.2 Da    PI: 6.0204
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0091s0063.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1211.1e-37341822129
                  NAM   2 ppGfrFhPtdeelvveyLkkkvegkk........leleevikevdiykvePwdLpk........kvkaeekewyfFskrdkkyatgkrkn 75 
                          p G +F+Pt  el++  L+kkv++++         ++++v++e+d+ +vePw+++         +++a+e + yf++++++ky++gkr+n
  Mapoly0091s0063.1.p  34 PWGWHFRPTGAELIT-NLNKKVKRQRqdrsryepEDISDVLREIDLSQVEPWEIKGipetcsirATHADELNQYFYTQKEQKYRHGKRSN 122
                          78************5.599999999967777766666669**************8457788664333344478***************** PP

                  NAM  76 ratksgyWkatgkdkevlsk......kgelvglkktLvfykgrapkgektdWvmheyrle 129
                          rat++g+Wkatg+dk+++ k      +++++g +k Lvfy+grap+g+ktdW++heyrle
  Mapoly0091s0063.1.p 123 RATRRGFWKATGRDKPIYGKinqkdrHKRVIGYRKALVFYEGRAPNGNKTDWILHEYRLE 182
                          ******************998887777777****************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.31E-3829200IPR003441NAC domain
PROSITE profilePS5100541.4933200IPR003441NAC domain
PfamPF023651.6E-1734181IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    Send to blast
MSTHYGSSTI GGALQFPEPS QPSISPISAN SKIPWGWHFR PTGAELITNL NKKVKRQRQD  60
RSRYEPEDIS DVLREIDLSQ VEPWEIKGIP ETCSIRATHA DELNQYFYTQ KEQKYRHGKR  120
SNRATRRGFW KATGRDKPIY GKINQKDRHK RVIGYRKALV FYEGRAPNGN KTDWILHEYR  180
LEADPDSTDE QWVACHMFIK ERNIPPRDVA DVSDLPNGGL DMGPDWPELP PLTVKEEPGF  240
PYSDHRTVTQ EQQQELGFHL PPCVRDDLSL PRLEEDDNNY SVHREVAADV VVIPRPETGR  300
MPPFDNDRLI ADLLYSYAEN PQQSIWPNLD GSVISDTLWN PPY*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A5e-242920111169Stress-induced transcription factor NAC1
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15257KVKRQR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6WH940.0A0A2R6WH94_MARPO; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36160.14e-42NAC domain containing protein 76