PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0091s0008.1.p
Common NameRSL2
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family bHLH
Protein Properties Length: 569aa    MW: 61712.6 Da    PI: 6.1037
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0091s0008.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.74.1e-084915311055
                          HHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH  10 rrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                          r RR+ri +++  L+ l+P+ a      K++ +++Le+A+ Y+k Lq
  Mapoly0091s0008.1.p 491 RHRRERITERLKILQHLVPNgA------KVDIVTMLEEAISYVKFLQ 531
                          89******************66......******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.02E-12480544IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.208481530IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.3E-11485539IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.4E-9487536IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.89E-9490535No hitNo description
PfamPF000101.6E-5491531IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009733Biological Processresponse to auxin
GO:0016049Biological Processcell growth
GO:0048766Biological Processroot hair initiation
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 569 aa     Download sequence    Send to blast
MANYDSSLQS GNSEETAVST SQALTSPCEA MWDGWTTQTS TASAGPPSIS LTDLQVQGSI  60
VHMKSSTNFQ SDLLSSWLSG FQTLSQAAGV LGAVDHDQPQ SQEGTGSLMY PDEFSRLNIC  120
STSSDERPDG VAHSESSHAS QLFIERCSDQ NIMRADREFC ETPVTEDSSK REESAPYFRS  180
TSAPNQSSNF DKVVRNTEQD QHMVRTPETD LSSRTSSPPS MQLASYGQMM QHLVGQYESN  240
PATTWLSCVT SSSSQLRPSD NGLRPVQGDL SRANTSSESI ILHHHRPGSN HFSSANDPYC  300
KASAENMYAE LHGLLTKTQQ DSLTGTIQLP QAPAATSACG WSQFTDANMQ GQQSIFASDA  360
STAAITPKPT RRTEDPSSSH AGKARASVVK VARSNPERQE KRSSRGHDDE SGSSSPALKR  420
SCIEHAIWQS NAAFLGRVSD PQFHASLGSG YGIGTSSSVD IHSSVGPALN TNGKPRARRG  480
SATDPQSVYA RHRRERITER LKILQHLVPN GAKVDIVTML EEAISYVKFL QLQVRYLSSD  540
EYWIYAPTTY NGVDVSMGMH FQGMDSQA*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT6338280.0KT633828.1 Marchantia polymorpha RSL class 2 bHLH transcription factor (RSL2) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0S3CWB80.0A0A0S3CWB8_MARPO; RSL class 2 bHLH transcription factor
TrEMBLA0A176WAN40.0A0A176WAN4_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP10481454
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.15e-44bHLH family protein
Publications ? help Back to Top
  1. Proust H, et al.
    RSL Class I Genes Controlled the Development of Epidermal Structures in the Common Ancestor of Land Plants.
    Curr. Biol., 2016. 26(1): p. 93-9
    [PMID:26725198]