PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Mapoly0086s0081.1.p

Organism

Marchantia polymorpha

Taxonomic ID

3197

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia

Family

Trihelix

Protein Properties

Length: 692aa MW: 78635.7 Da PI: 6.2027

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Mapoly0086s0081.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	42.9	1.3e-13	62	147	2	85
trihelix 2 WtkqevlaLiearremeerlrrg......klkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 Wt e l+L +a+re+ er +g k ++ +W+ v ++++ + ++rs +qCk++we+++ ++kki + ek ++++ ++ q+ Mapoly0086s0081.1.p 62 WTVGECLVLQAAKREDYERQTNGgpkekhKTAAERWQGVEEFCWTHNVQRSGQQCKDRWEKMSADFKKIYDYEKHVSNGQM----HYWQM 147 99********998888777643433336999***************************************9766665....44444 PP
2	trihelix	44	5.7e-14	258	341	2	79
trihelix 2 WtkqevlaLiearr.emeerlrrgk.....lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstc 79 Wt e l+L a+r ++e+++++g ++ +W++v +++++rg+ rs +qC+++w++l+ ++kki + ek++ +++s + Mapoly0086s0081.1.p 258 WTLPESLVLQGAKReDLERQYNSGPkekhlSATERWQAVEEYCWSRGVYRSGQQCRDRWDKLSADFKKISDYEKQNVIGQKSYW 341 99999999998887245556665534455588899***************************************9866655555 PP
3	trihelix	41.9	2.7e-13	446	525	2	79
trihelix 2 WtkqevlaLiearremeerlrr..gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstc 79 Wt +e ++L +a++++ er + +++++ +W++v +++ ++ + rs +qCk++we+++ ++kki + ++ t+++ + + Mapoly0086s0081.1.p 446 WTLEECMVLQAAKQDDFERQAKekNRKAADRWQAVEDFCFRQNVCRSGQQCKDRWEKMSVDFKKIHNYQRHVTDDTANYW 525 ***********99988877622457899***********************************9999888777666 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50090	6.586	54	124	IPR017877	Myb-like domain
Pfam	PF13837	1.2E-9	59	147	No hit	No description
PROSITE profile	PS50090	7.166	250	320	IPR017877	Myb-like domain
Pfam	PF13837	2.4E-10	255	334	No hit	No description
PROSITE profile	PS50090	7.039	438	504	IPR017877	Myb-like domain
Pfam	PF13837	1.6E-8	444	517	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 692 aa Download sequence Send to blast
MAPDVNNSTA DSGVLTIVNN GNQIPAQPLC VSANLQPVDQ GGGVDGGGGG ARNGRDYKRT 60 NWTVGECLVL QAAKREDYER QTNGGPKEKH KTAAERWQGV EEFCWTHNVQ RSGQQCKDRW 120 EKMSADFKKI YDYEKHVSNG QMHYWQMTLE EKKVKRLPNT FFQEVYNGLS QWFTRGRGAD 180 TANGNQDNLG SLLREPEASA KAGSVGRFSG SDEAESEEAA AEPLLESGSG KRRSTDGDLA 240 SGEREGIANG REYRRTNWTL PESLVLQGAK REDLERQYNS GPKEKHLSAT ERWQAVEEYC 300 WSRGVYRSGQ QCRDRWDKLS ADFKKISDYE KQNVIGQKSY WLMTPEEKKA KRLPSTFWEK 360 LFSSMSDWFG KSRNIDLRVV IHDSSQPQRQ DGDEGFFGTD EDEDGTDPES APVFDSSVDK 420 ERKVDGELLV SAHDEKPGRD YKKTNWTLEE CMVLQAAKQD DFERQAKEKN RKAADRWQAV 480 EDFCFRQNVC RSGQQCKDRW EKMSVDFKKI HNYQRHVTDD TANYWTLTGE EKKSKRLPLT 540 FWQDVFVAMS KWFTKDRNGG SETIAHDSEA QHQEDSGRAG SNKDLSGSDQ GDSDPGSDPF 600 VDSRSRKRRK ASVKINESLA EIMERSNLAT QKILLECEDR KDRRLERTLE ANVRRLERTL 660 EANERIAISY CQAFVSLADA IRSVAATNPQ G*

Sequence ? help Back to Top

Protein Sequence Length: 692 aa Download sequence Send to blast

MAPDVNNSTA DSGVLTIVNN GNQIPAQPLC VSANLQPVDQ GGGVDGGGGG ARNGRDYKRT  60
NWTVGECLVL QAAKREDYER QTNGGPKEKH KTAAERWQGV EEFCWTHNVQ RSGQQCKDRW  120
EKMSADFKKI YDYEKHVSNG QMHYWQMTLE EKKVKRLPNT FFQEVYNGLS QWFTRGRGAD  180
TANGNQDNLG SLLREPEASA KAGSVGRFSG SDEAESEEAA AEPLLESGSG KRRSTDGDLA  240
SGEREGIANG REYRRTNWTL PESLVLQGAK REDLERQYNS GPKEKHLSAT ERWQAVEEYC  300
WSRGVYRSGQ QCRDRWDKLS ADFKKISDYE KQNVIGQKSY WLMTPEEKKA KRLPSTFWEK  360
LFSSMSDWFG KSRNIDLRVV IHDSSQPQRQ DGDEGFFGTD EDEDGTDPES APVFDSSVDK  420
ERKVDGELLV SAHDEKPGRD YKKTNWTLEE CMVLQAAKQD DFERQAKEKN RKAADRWQAV  480
EDFCFRQNVC RSGQQCKDRW EKMSVDFKKI HNYQRHVTDD TANYWTLTGE EKKSKRLPLT  540
FWQDVFVAMS KWFTKDRNGG SETIAHDSEA QHQEDSGRAG SNKDLSGSDQ GDSDPGSDPF  600
VDSRSRKRRK ASVKINESLA EIMERSNLAT QKILLECEDR KDRRLERTLE ANVRRLERTL  660
EANERIAISY CQAFVSLADA IRSVAATNPQ G*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2R6WIS7	0.0	A0A2R6WIS7_MARPO; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP1881	16	37

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	6e-25	Trihelix family protein

Link Out ? help Back to Top
Phytozome	Mapoly0086s0081.1.p