PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0068s0102.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family TCP
Protein Properties Length: 531aa    MW: 53847.8 Da    PI: 7.5642
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0068s0102.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP123.91.8e-381002482132
                  TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg.. 88 
                          ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eL +++d++tieWLlqqa+pai+++tgt++ +a ++  +++ +ss++       
  Mapoly0068s0102.1.p 100 PPKRSSTKDRHTKVDGRGRRIRMPASCAARIFQLTRELAHKSDGETIEWLLQQAEPAIIAATGTGTVPALASsLQGALRSSSG----Maa 185
                          789*************************************************************9999944443444433333....123 PP

                  TCP  89 ...................kaaksaakskksqksaasalnlakesrakarararertrekmri 132
                                               ++++  s++ q+++  + + ++e  a a +r  +++r  m  
  Mapoly0068s0102.1.p 186 aaaggrpgtlhgsmglaglGPSQADLDSQRMQEQQVRVAQSQREWDAGAEERVMQQNRAAMEE 248
                          335677888888899999844444444444444444455555555566666655555555543 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036349.3E-35105246IPR005333Transcription factor, TCP
PROSITE profilePS5136927.396106160IPR017887Transcription factor TCP subgroup
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0007623Biological Processcircadian rhythm
GO:0008283Biological Processcell proliferation
GO:0009735Biological Processresponse to cytokinin
GO:0010229Biological Processinflorescence development
GO:0010252Biological Processauxin homeostasis
GO:0031540Biological Processregulation of anthocyanin biosynthetic process
GO:0042023Biological ProcessDNA endoreduplication
GO:0048467Biological Processgynoecium development
Sequence ? help Back to Top
Protein Sequence    Length: 531 aa     Download sequence    Send to blast
MAAMGGAGIG GAGHGPSQVD PSLGMGGMGQ EYGEQQMTGL QMQRGGGSGG GGGGASGSGS  60
QQQQQQQQQQ QQQQQQEAQQ GSMVPSGGGQ EIQQPPKKAP PKRSSTKDRH TKVDGRGRRI  120
RMPASCAARI FQLTRELAHK SDGETIEWLL QQAEPAIIAA TGTGTVPALA SSLQGALRSS  180
SGMAAAAAGG RPGTLHGSMG LAGLGPSQAD LDSQRMQEQQ VRVAQSQREW DAGAEERVMQ  240
QNRAAMEENR RLSMGHGGHG GHGEMSHDVM AGFQHEGLVG EEGMGVGDSA DSKGGIRKRA  300
RPGSSGGPLA RFKEDPEPVR PVRATASRQG GMQQGPGGSN LMSTMWAVGP AVAGVSSSGG  360
MPGTIWMLPV SGSSTPGVMA GPGNEQIWTF PSAGQAGTMY RMAAPPTSIQ LGPSGGGGNQ  420
PSSSNPMMPV LSSGGVALMP RINLSGGMGL ELQGGHLGGH MPLGSMLLQP GAQNLPGTGL  480
GLGGEGSHLG MLAALNAYSQ RNVNPEQQHH SMGGSGHQQG DSGDDPTSSQ *
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00224DAPTransfer from AT1G69690Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024386490.11e-130transcription factor TCP22-like
RefseqXP_024386491.11e-130transcription factor TCP22-like
RefseqXP_024386492.11e-130transcription factor TCP22-like
RefseqXP_024387677.11e-130transcription factor TCP22-like
TrEMBLA0A2R6WPW80.0A0A2R6WPW8_MARPO; Uncharacterized protein
STRINGPP1S348_6V6.11e-129(Physcomitrella patens)
STRINGPP1S67_183V6.11e-129(Physcomitrella patens)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP9221459
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69690.16e-41TCP family protein