PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0068s0088.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family ERF
Protein Properties Length: 671aa    MW: 71501.8 Da    PI: 8.9662
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0068s0088.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.67.3e-19461511255
                  AP2   2 gykGVrwdkkrgrWvAeIrdpseng..krkrfslgkfgtaeeAakaaiaarkkleg 55 
                          +y+GVr+++ +g+++AeIrd       + +r++lg+f+taeeAa a+++a+++++g
  Mapoly0068s0088.1.p 461 HYRGVRQRP-WGKFAAEIRD----SarQGARIWLGTFDTAEEAATAYDHAALSMRG 511
                          7********.**********....33334*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003805.8E-35461525IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.7E-31461519IPR001471AP2/ERF domain
PfamPF008472.9E-13461511IPR001471AP2/ERF domain
PROSITE profilePS5103223.354461519IPR001471AP2/ERF domain
CDDcd000181.59E-29461520No hitNo description
SuperFamilySSF541713.2E-22461520IPR016177DNA-binding domain
PRINTSPR003671.3E-10462473IPR001471AP2/ERF domain
PRINTSPR003671.3E-10485501IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0001944Biological Processvasculature development
GO:0010200Biological Processresponse to chitin
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0051301Biological Processcell division
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 671 aa     Download sequence    Send to blast
MFIGLGSPAA TTRRMQLGEE GGAVVACSAS APAAPHTQTN LKEKTGKSFL DCFREHLLGS  60
DEFEGSTMDP CAKSSMKPVL PPTSSPPRSI DHRIDAFQGF QSFPEQQASI SLSDSFTFFS  120
SSESAPAPAP ALAQGPFAAP PRGGVNEANV AAAAAGPAKK IEDASSPTTS NSSGSKLLMI  180
TRKLKYGLGE KLAESIRETV GEVVKNEVKK DSANIGVVDQ FCKGFPAAAA SAAAASDASS  240
SPPRPFGEDF LNSEPCQSES TTVTSLSDTS SGASSISPTQ RNRRALPNLS LPRPCAVTEE  300
FLRDSETRLQ QGGAAASWQR SPRLSPYGSK RIVSTPPSLS AHLTHHNEPL PLNENDSEDM  360
ILYGVLKEAA NTGWAPTTPR PAAVVAPAPL AQLQLQQQGH PIVKREPADV APLKRSLPKV  420
APTMSIAQKM KQQQQQHQQH HQQQQQQRKD VVPAAKPQHH HYRGVRQRPW GKFAAEIRDS  480
ARQGARIWLG TFDTAEEAAT AYDHAALSMR GSRALLNFPA KLAVPSSSRA SSSASNAIAE  540
KVSAARRQHS DKAAAASLLR ASQNNMNTGK VDASSVNQQQ KRPRDDTAPD SKPQSKQARI  600
AVSQPWHVGP QAQQQQQQQQ GSSVMEVEDL GVDFLEELLS RSSGPDLTTA PPAIPGFAGF  660
GVSDYFPEFF *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-28461522566ATERF1
3gcc_A2e-28461522566ATERF1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6WPV50.0A0A2R6WPV5_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.15e-27ethylene responsive element binding factor 1