PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0057s0043.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family MYB_related
Protein Properties Length: 1043aa    MW: 114630 Da    PI: 8.8941
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0057s0043.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.13.6e-07891935148
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                          rg+W + E ++l  ++ ++G++ WktI +++   R +  ck +w++++
  Mapoly0057s0043.1.p 891 RGKWLEVELQQLRTLFLEHGPD-WKTIGSKLD--RPAQVCKVKWRSLR 935
                          89******************88.********8..***********986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.608.1E-5812881IPR009057Homeodomain-like
PROSITE profilePS500905.03812886IPR017877Myb-like domain
SMARTSM007170.011816888IPR001005SANT/Myb domain
SuperFamilySSF466891.01E-7866937IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.3E-5887934IPR009057Homeodomain-like
SMARTSM007172.1E-5890937IPR001005SANT/Myb domain
PROSITE profilePS500907.399890935IPR017877Myb-like domain
PfamPF002491.2E-5891934IPR001005SANT/Myb domain
CDDcd001670.00648893934No hitNo description
SMARTSM007170.129501018IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.606.9E-59521027IPR009057Homeodomain-like
PROSITE profilePS500906.0989521016IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1043 aa     Download sequence    Send to blast
MECRCTFKRT GSTSQLKSSG DETEPNVGSF IDKRNLEHAR RAPPFPPAGG FKIVEFVERS  60
IWYKDLATGE LHSLDSVIGM DSQKEIKAAA AADPKQEEIM ACTLSKPSET NPLESRKLRK  120
SKKNRQSDHD LSIQTPAAAG GRIASNVDDA LVANHSRSGA ESSEPMKSKR SRKKHHDSPG  180
GDGGGGGEDT RTPADNGRLG DPESRDLTCA MDTKRCKQQQ CRDDRGASAH ATDGVVGEIV  240
SRFEARVSSF TEAKKSKKNH TSGYGERSAL ADAQVTELSD DQDVEARSWL PSEKPLDSLK  300
AKMPKKSGSS SCKREQAHDR NTDCQSSAAA AAASADDNDD DDDDEIMQDV IDTSSLVKVK  360
KLKKLKKKPS PLSPHQADGI KDFNAAAAAA PDLGVLSRTL DYAPSAVESS KTPKRKQSKS  420
SIAAGLVQFG EDARRCISSE AADGTLVPRS QTCSPAKPKK PKKHRPATGV EASIIDLDDE  480
VQVLESPVPL SSRTPEKEAC RSRSAMKHSS VPSAAAIGCN FDGGGMSKAP RDSSRASQSK  540
KSERKCRDDG GRGSEIVDEG KVLAVAGGGT FSSMATKPKT AEASDHRAKN EIVASGGIEL  600
IDLDDHAFDH FSSPCKMPRK LRKRRKHEYD EEDDGGGQAD TISAELEAAS PSRSPPHAAA  660
ARLDSSGSRT LSKKERKKLK RIGGLDVEPQ AGQIVPLGRR DLIHVREDAA DADTELLLEE  720
AEENGARAQE VRFLTSRKKL KGNKRRQRSG DERECASEFH GGDLSPLQIC NPSAPKKVKK  780
KKRVRFLLPE GEIVAPEDEE TRKRSWSYDH NTPDLHFGKF TAQEDEAIKT AVDGYIEERG  840
WDKVKGLEML LNTSCYKEAR GAWLSIANCL PHRPVKQINS RARRLLEGGK RGKWLEVELQ  900
QLRTLFLEHG PDWKTIGSKL DRPAQVCKVK WRSLRQAPVK TDCDRGLCKH PGPWTQEERD  960
QLQSYVLLNL ESRRVLPEHD EVGRSRWRRT EINWEQVADQ MNRRGGACAE VWYKKIYPFL  1020
FEGGFISEHE PARHLKSALK RP*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1361368LKKLKKKP
2672680KKERKKLKR
3739745LKGNKRR
4776784KVKKKKRVR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6WU760.0A0A2R6WU76_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP53221418
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41020.12e-19MYB_related family protein