PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0051s0040.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family ERF
Protein Properties Length: 496aa    MW: 51930.8 Da    PI: 6.8622
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0051s0040.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.71.4e-18104152355
                  AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                          ++GVr++  +grWvAeIr+p+    + +r +lg+f ta eAa+a++ a++ ++g
  Mapoly0051s0040.1.p 104 FRGVRQRQ-WGRWVAEIREPR----CrTRMWLGTFATAIEAARAYDDAALTYHG 152
                          8****999.**********82....57*************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103221.68103160IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-20103161IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.6E-28103162IPR001471AP2/ERF domain
SMARTSM003806.9E-34103166IPR001471AP2/ERF domain
PfamPF008473.6E-12104152IPR001471AP2/ERF domain
CDDcd000187.47E-28104162No hitNo description
PRINTSPR003676.7E-9104115IPR001471AP2/ERF domain
PRINTSPR003676.7E-9126142IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009737Biological Processresponse to abscisic acid
GO:0010286Biological Processheat acclimation
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 496 aa     Download sequence    Send to blast
MANDRRQVKV ALTRQPSGSI PRPPPMGGGI ARQLSGEVAG SVPMKPASAP SSPAVGRKRS  60
AATAAASDST SSESKEMGAG QQQSGSKPSG RQRRGGPENG NHTFRGVRQR QWGRWVAEIR  120
EPRCRTRMWL GTFATAIEAA RAYDDAALTY HGPGARLNLP QSQPSANSTA TSAVAPHPMS  180
GLARSASCNV GNYCTSDPRE MPGSMLQRTS SGPANLLMRT SSSPAQCAAM AVDSGAMFSS  240
YASDLRIEEK AAKKMYVPSA AAAAGMFAGS APGAMSESPQ TVFVNGALDR YDMGTKFVGA  300
PVKSEPVSDF PAVYQSVGSN ASSSMMNHAS FGDMFGGDLG AVVSQQQHSA QNLRTPKVEQ  360
NLRADAPSSA STSISSVNTV GAGVLGNCGS DEGSPTSFWT MDSDSKFDGS CVSTDWLQHV  420
LDQQGPPAPV TSTSASSMLT SRLGSLEKAE LGPWDIDICS PPPTLDLPLE ESLHFDDDFL  480
SGQLFQERSM QYELL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A6e-1396161973Ethylene-responsive transcription factor ERF096
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00302DAPTransfer from AT2G40340Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6WX570.0A0A2R6WX57_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.14e-19ERF family protein