PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0049s0118.4.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family Nin-like
Protein Properties Length: 446aa    MW: 48868.1 Da    PI: 6.1541
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0049s0118.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK85.64.3e-27351401252
               RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                          + +++++dl+++F+lpi++AAkeLg+c+TvLK+iCR++G++RWPhRkiks+
  Mapoly0049s0118.4.p 351 TGKLKMSDLAQHFHLPINAAAKELGICPTVLKKICRRNGMRRWPHRKIKSI 401
                          56899********************************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151919.247341421IPR003035RWP-RK domain
PfamPF020423.1E-25354401IPR003035RWP-RK domain
Sequence ? help Back to Top
Protein Sequence    Length: 446 aa     Download sequence    Send to blast
MAGGQLGSPN CDGVVLNSFN SPRFDISEFL KTPKDSTSEE PFFNFAGFNI PTPTFNLLNP  60
LPPFNSRRNP RGEGSEPDFS ALLFDKGVES EGTSVDDTLN GELIAFDEID ADIAKDSFAL  120
FSGTHENFLN HPISPLRINV PYHSAGTRIP LNFPPPMFTQ GSYLGGEPGG LMEVEDRALA  180
SMEHGASTSG GANPLMCPST PMDWSMPREG ALQTNSSQQH NTLQCDSCQI LRRIIHSNGV  240
QDTKLEIHGC DGQSYHAVLQ TRFCIDDGFP ATLEQQMVEF PVGNAEYVKQ FLLQYSLLRR  300
KEGFVLRHDS LSAGQSKLHR SGSMDSGEHT ETAMTPVKPP KSNAAAQRER TGKLKMSDLA  360
QHFHLPINAA AKELGICPTV LKKICRRNGM RRWPHRKIKS IERIIATLEQ TIAEGAGQGD  420
EGIRMEIAML RNERAQLCAG LLGET*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024358583.10.0uncharacterized protein LOC112273714 isoform X4
TrEMBLA0A2R6WYB40.0A0A2R6WYB4_MARPO; Uncharacterized protein
STRINGPP1S387_8V6.10.0(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53040.14e-14RWP-RK domain-containing protein