PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0036s0136.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family WRKY
Protein Properties Length: 653aa    MW: 70357.6 Da    PI: 5.8835
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0036s0136.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY832.9e-26225285259
                          --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                          dDg++WrKYGqK++k+s ++rsYYrCt++   gCp+ k v+rs+edp++ ++tY+g+H ++
  Mapoly0036s0136.1.p 225 DDGFTWRKYGQKDIKESSYARSYYRCTHKtdlGCPSIKMVQRSDEDPNYYDVTYRGNHICP 285
                          8***************************99999*************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.1E-25214285IPR003657WRKY domain
SuperFamilySSF1182906.15E-23222286IPR003657WRKY domain
SMARTSM007744.3E-34224286IPR003657WRKY domain
PfamPF031063.7E-24225285IPR003657WRKY domain
PROSITE profilePS5081120.817225287IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009751Biological Processresponse to salicylic acid
GO:0009816Biological Processdefense response to bacterium, incompatible interaction
GO:0010150Biological Processleaf senescence
GO:0010193Biological Processresponse to ozone
GO:0010200Biological Processresponse to chitin
GO:0031347Biological Processregulation of defense response
GO:0042542Biological Processresponse to hydrogen peroxide
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0009507Cellular Componentchloroplast
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 653 aa     Download sequence    Send to blast
MEQESEGQAA KMRILEFERK VRSEAFLGCQ QIKYVENRLR DAPEGGLLGE AEGADAQALR  60
TTILNASAAI VEKFSKVIRL LSTPPSATRS TNSMATGGSK AQDQLVAKAG NLTLDADSPL  120
LSGDDCHTPG RMQFTSPTTS PCDTPLSGSG LSEGGSPVRP NHVAPDSDED TVGNLSRRRS  180
HDVSTSAADP DLSDKPALPK KRKYLPKYQT KQRAIGTGDN DGPPDDGFTW RKYGQKDIKE  240
SSYARSYYRC THKTDLGCPS IKMVQRSDED PNYYDVTYRG NHICPLLEQR TWHFGLAPSH  300
IAIHELLGSD PKGSSSSALI MGSGALHLST PGQSQENVIV GLGPSPFPPP KSTSGLTAVP  360
CSRRSNTGTI TSTTITTTTG SPEHNQIGGP RVGMSSASTA QQQQQQQETQ QNIPAKVAAN  420
ANCRLDQDYN QSRSARDCLF SGSNLRSLLL GRTDGGSLGL ELEDLSVHQV LQQQQQRQTT  480
ANQGGGEMER MREIMRGQIS HDSVSVSMAD SADASRAQQQ YGERWAESNM LVRSFQQQQR  540
PPAAQSEVTG QYTPSPATSE VGTSHVQQIR PAASQISLVP SYSGPGAEIY NIHTTESDAS  600
EVISSEPSPS LYGGIPSTMG MPPYMIGSPG SHQQLYMDDY DFGSYYEQSQ TD*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A2e-16225284968OsWRKY45
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6X4Y00.0A0A2R6X4Y0_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.14e-21WRKY family protein