PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0035s0146.2.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family bHLH
Protein Properties Length: 584aa    MW: 63122.4 Da    PI: 8.7574
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0035s0146.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.21.7e-09338383555
                          HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          h +rEr+RRd++  ++++L +llP+a      K + ++i+   ++Y++ Lq
  Mapoly0035s0146.2.p 338 HVQRERQRRDDMSAKIATLETLLPPA-----SKRDRVSIVHDGIHYVRALQ 383
                          899**********************9.....79***************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.767333382IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.2E-12337401IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.76E-12337400IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.79E-8338387No hitNo description
PfamPF000107.8E-7338383IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.4E-6339388IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 584 aa     Download sequence    Send to blast
MSSVVFVAQD ALEYRSRIMS EFSSGAFKPF GSGAQFVLPQ QKFGVRAPAA EDESYQDVKW  60
RVQDNMPMDG DSSDHSGFRS WPDSALSLSS SSSAHASAPC ATFDHFNVNE HENVVVNEMF  120
SSREAPAYEP SMPHSLNLQY LGSSSPAQLD ELYGGYHGGR WQAAPDPNGP CNSSDVLVVV  180
PGNTQDTTKP LTYHLASSNT SCDSSADSFS FQKFSPHSTR LSAASGTLPG SMSGAPLAMA  240
DSLGQNNKAT APFRNSFRPP TADLRRFQAR GRGRGDFRAA ASTSRIEQQM SLGMSSQSLA  300
ANYHQALRVA KTPTDFTLGK RQLNGSRVPD MLSGHLEHVQ RERQRRDDMS AKIATLETLL  360
PPASKRDRVS IVHDGIHYVR ALQEKVKALQ GQLQEAKRRA EAGAQDKKWS CLGSSSNVDF  420
ASSSRNLSSS RAVLNASRTS GRFRLGPMTR TTSTTSFNIG GTQSGRAEFE GSGGFSDSPL  480
LGLTPKSEPL PSRGPISVEL HVQVDRPGEQ VQVVKCECRY SYLSSVMRTL DQLQLSLHRC  540
SVTKLHDYVI CVIVIKPTSN CSTAHAVSSA QIATLLKIAA VDS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A176WD640.0A0A176WD64_MARPO; Uncharacterized protein
TrEMBLA0A2R6X5J90.0A0A2R6X5J9_MARPO; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46510.13e-10ABA-inducible BHLH-type transcription factor