PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0028s0101.3.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family bHLH
Protein Properties Length: 440aa    MW: 47896.5 Da    PI: 6.5004
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0028s0101.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.18.5e-10235281455
                          HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                           h  rEr+RRd++  +++ L  llP++     +K + a+i+   v+Y+ksLq
  Mapoly0028s0101.3.p 235 EHVLRERQRRDDMSCKIAILEGLLPPC-----PKRDRASIVHDSVQYVKSLQ 281
                          6999**********************9.....7******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.383231280IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.2E-13234296IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.1E-7235281IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-12235297IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.70E-8236285No hitNo description
SMARTSM003531.6E-8237286IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 440 aa     Download sequence    Send to blast
MCPDVIRGPY SRPGIFFPQE TFQKCDSQQG FFNAAFDSLF ELHDDRRSAL LLSCERAQQQ  60
IHDPGNYANY QPMHCDSPPL TEIDTGWMSD VFEGLPVISQ EMTHVPVAEI SAPFSNYSPF  120
NSPLPVSLDL LSSEAEEGQS NQQSSPTCAG AVPLPLDIDQ TGPICPDSNH SVLEAAAFSP  180
PCPQSLGATS PPAAAVVPKP LKARGSKRCD RGQQKPKRMP KWAREVTLAP SEQVEHVLRE  240
RQRRDDMSCK IAILEGLLPP CPKRDRASIV HDSVQYVKSL QQGVEELQKK LVALKRSNGS  300
PATTITTTIT TTQISSLPQL AKATSPSSSP ARDSTSPAID AGVEDTETVP PKLFHLVEFH  360
VQLEGCSEAA KLTRCKCRSD YLSSTMRVLE QLNVEVSRCS VTKMFDHFMC VIVAKPRVSA  420
VPAPTSTSIA TSLKKAVEL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6X9L00.0A0A2R6X9L0_MARPO; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22770.12e-09bHLH family protein