PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0012s0026.1.p
Organism
Marchantia polymorpha
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family bHLH
Protein Properties Length: 306aa    MW: 34092.7 Da    PI: 8.1597
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0012s0026.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.74.8e-09234282655
                          HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
                  HLH   6 nerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55 
                          +++Er RR ri +++ +L+ llP++    s+   + a +L + ++YI +Lq
  Mapoly0012s0026.1.p 234 SIAERLRRIRITERLRKLQALLPHPR--LSTHnKDTAYMLDEIIDYIEYLQ 282
                          689*********************63..55555788**************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.017228281IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.97E-11232295IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.89E-8232286No hitNo description
Gene3DG3DSA:4.10.280.107.4E-11233292IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.7E-7234287IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.6E-6234282IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MQIELSTTRV HICRGSAILQ IHKMDVNSSV YRYGVCPWSP RSHDGAQVEW KSTGQGSLIE  60
NQLILTCTDS PSSLQAVTSP SFRPFFSPGG EYVHPPLSMA SRQTLMEVPQ NAISDHIGNS  120
FLSAPKGILD ISSTQTVGNT SKDSLTLDGR WTKSLQISPD VNFHIPMGIQ KAKDTLSRNV  180
ISDLCSGPTS NQGAVIHAPS SYEMALSNYR NHYVNCLPVN CMRARRGCAT NPRSIAERLR  240
RIRITERLRK LQALLPHPRL STHNKDTAYM LDEIIDYIEY LQREVEILKA RKCSCDVEDT  300
FDDSQ*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6XIX90.0A0A2R6XIX9_MARPO; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G09180.14e-11bHLH family protein