PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Mapoly0011s0057.1.p

Organism

Marchantia polymorpha

Taxonomic ID

3197

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia

Family

Trihelix

Protein Properties

Length: 812aa MW: 88630.1 Da PI: 6.7978

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Mapoly0011s0057.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	35.7	2.2e-11	563	639	2	71
trihelix 2 WtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekkr 71 W ev +L++a+++ +er++ ++ + +W++v k+++e ++ r + Ck+kwe + +yk ik++++k Mapoly0011s0057.1.p 563 WDTWEVILLVQAKKYEWERSECSSgkdrveTSGERWKKVEKFLKENKVvDRDGIACKNKWEAILSDYKSIKDWNRKP 639 9999*************9954323334499*******988877***********************984 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	2.8E-8	561	642	No hit	No description
PROSITE profile	PS50090	6.504	575	626	IPR017877	Myb-like domain

Sequence ? help Back to Top
Protein Sequence Length: 812 aa Download sequence Send to blast
MSVAAGQILE MKPGENVWDA IAADLAAVTA ATNGSDEIAD EDIRVEVQKV KIAELSHTSD 60 SLELESGVNK SHDCTGKIET NDLHADGISD SGLDCSSKPL LEGAHSGVKV GDELNVDSLL 120 CQEEASEAKD DYAQNVVETL TCSTEEDANN HSRHVADEEK KGKEDKGGNI LGKRNRKLNH 180 RATRSSGKKL KLQAPVNSDA GDISHRDKQD VTISSEGSLS KAQNLQKKPE WNEADGANIH 240 SLPELEKLQR VFTSLNTACG YLLKQQKIAS WENVKQAMKQ LSGADSETIS VDDVRRLSQL 300 CPQIVVLSQF SGEGEDISFQ IELFDPADGV KLNPPNSSNG STAVDAHDGG TSKSISAGKK 360 IGDSEARVIV ESRQKAFQMS LAQVAHQFQA PQSTSVSVGG DEHLKHPKLP HPAMLRHPTH 420 EGRHSMVPAL IGPPAQQLVL PRPPLLPQQL QHSYVNMSDA YPGLPFPLPF QPTNGYGPFG 480 SFPQPQCNNY AGYQLSNHPS SIPSSSQLSS MPMQSNVPHR SPSTTIIPLP IYADTPEAPS 540 APEPSPYHGL SLNKAKRRRS RNWDTWEVIL LVQAKKYEWE RSECSSGKDR VETSGERWKK 600 VEKFLKENKV VDRDGIACKN KWEAILSDYK SIKDWNRKPG NTVYSLLSPA EKKAANLPAV 660 FVSSLLELMD TFQGKACHIS PPSVLDPLGK TNPAVSGGDA SRAEEHSGEA HPSAHGNGTH 720 GSAGRRKKPN GGWSPLVAAF DRLSANMLNI EKGRDERSER LWALENRKYD LEKNKYELQA 780 RKVDAEREDR KGLVRVLGNL AGAFHRMADK M*

Sequence ? help Back to Top

Protein Sequence Length: 812 aa Download sequence Send to blast

MSVAAGQILE MKPGENVWDA IAADLAAVTA ATNGSDEIAD EDIRVEVQKV KIAELSHTSD  60
SLELESGVNK SHDCTGKIET NDLHADGISD SGLDCSSKPL LEGAHSGVKV GDELNVDSLL  120
CQEEASEAKD DYAQNVVETL TCSTEEDANN HSRHVADEEK KGKEDKGGNI LGKRNRKLNH  180
RATRSSGKKL KLQAPVNSDA GDISHRDKQD VTISSEGSLS KAQNLQKKPE WNEADGANIH  240
SLPELEKLQR VFTSLNTACG YLLKQQKIAS WENVKQAMKQ LSGADSETIS VDDVRRLSQL  300
CPQIVVLSQF SGEGEDISFQ IELFDPADGV KLNPPNSSNG STAVDAHDGG TSKSISAGKK  360
IGDSEARVIV ESRQKAFQMS LAQVAHQFQA PQSTSVSVGG DEHLKHPKLP HPAMLRHPTH  420
EGRHSMVPAL IGPPAQQLVL PRPPLLPQQL QHSYVNMSDA YPGLPFPLPF QPTNGYGPFG  480
SFPQPQCNNY AGYQLSNHPS SIPSSSQLSS MPMQSNVPHR SPSTTIIPLP IYADTPEAPS  540
APEPSPYHGL SLNKAKRRRS RNWDTWEVIL LVQAKKYEWE RSECSSGKDR VETSGERWKK  600
VEKFLKENKV VDRDGIACKN KWEAILSDYK SIKDWNRKPG NTVYSLLSPA EKKAANLPAV  660
FVSSLLELMD TFQGKACHIS PPSVLDPLGK TNPAVSGGDA SRAEEHSGEA HPSAHGNGTH  720
GSAGRRKKPN GGWSPLVAAF DRLSANMLNI EKGRDERSER LWALENRKYD LEKNKYELQA  780
RKVDAEREDR KGLVRVLGNL AGAFHRMADK M*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2R6XJR8	0.0	A0A2R6XJR8_MARPO; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP12351	2	5

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	5e-07	Trihelix family protein

Link Out ? help Back to Top
Phytozome	Mapoly0011s0057.1.p