PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Mapoly0002s0204.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
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Family | Trihelix | ||||||||
Protein Properties | Length: 305aa MW: 34619.2 Da PI: 8.6011 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 42.8 | 1.4e-13 | 43 | 122 | 2 | 75 |
trihelix 2 WtkqevlaLiearremeerlrrg......klkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtses 75 Wt ev++L +a+re+ er ++g k ++ +W ++ + ++ + ++rs++qC++kwe+l ++kk+ + e++ ++ Mapoly0002s0204.3.p 43 WTVPEVMVLQAAKREDFERHSKGglkekhKTAQERWLWIEDICWGHAIHRSAQQCQDKWESLVPEFKKVLDYERNLPIGQ 122 **************99999998644444468899***********************************99999864444 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50090 | 6.319 | 39 | 105 | IPR017877 | Myb-like domain |
Pfam | PF13837 | 5.0E-10 | 42 | 117 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 305 aa Download sequence Send to blast |
MGEHPSEVLA GDHRAMSVDE DVVYEEPGHA GSRKGRVYKK GAWTVPEVMV LQAAKREDFE 60 RHSKGGLKEK HKTAQERWLW IEDICWGHAI HRSAQQCQDK WESLVPEFKK VLDYERNLPI 120 GQKSYWLMIP EERKKTPKLP PNLPKEVFSA LFEWYLKSKT IDQGDLLVDN STPPRTGNSS 180 SMAGSNGEFS GIEGEGTNDN RTSGLKRKLH SKTVDGVGSV LEGNNKNVVA AMMKCEDRKD 240 KRHRDKLELS LQRHRETMEM NMQRHRESLE LNQKLGEGYI SALCSIGEGL KQLVNTLQST 300 SRHM* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024384743.1 | 8e-82 | trihelix transcription factor ASR3-like | ||||
Refseq | XP_024384744.1 | 8e-82 | trihelix transcription factor ASR3-like | ||||
Refseq | XP_024384745.1 | 8e-82 | trihelix transcription factor ASR3-like | ||||
Refseq | XP_024384746.1 | 8e-82 | trihelix transcription factor ASR3-like | ||||
Refseq | XP_024384747.1 | 8e-82 | trihelix transcription factor ASR3-like | ||||
TrEMBL | A0A176VYY8 | 0.0 | A0A176VYY8_MARPO; Uncharacterized protein | ||||
TrEMBL | A0A2R6XUF0 | 0.0 | A0A2R6XUF0_MARPO; Uncharacterized protein | ||||
TrEMBL | A0A2R6XUJ6 | 0.0 | A0A2R6XUJ6_MARPO; Uncharacterized protein | ||||
STRING | PP1S314_53V6.2 | 3e-81 | (Physcomitrella patens) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35640.1 | 7e-18 | Trihelix family protein |
Link Out ? help Back to Top | |
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Phytozome | Mapoly0002s0204.3.p |