PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010113346.1

Organism

Morus notabilis

Taxonomic ID

981085

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus

Family

bHLH

Protein Properties

Length: 318aa MW: 34986.4 Da PI: 5.7515

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010113346.1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.1	1.8e-09	43	92	1	54
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r++ + rE+ RRdr+N+ f eL l ++ +K++Ka+iL+ ++ +k+L XP_010113346.1 43 RKVQKADREKLRRDRLNEHFLELGNALDPD----RPKNDKATILTDSIQMLKEL 92 5677889******************997....79*************998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	12.97	42	92	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	1.85E-8	43	96	No hit	No description
SuperFamily	SSF47459	1.44E-13	43	112	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.8E-12	43	115	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	3.2E-7	43	92	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	9.1E-8	48	98	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence Send to blast
MERWQSDDFS PASASSPSHP NSTRSNSDSR QRTDVEGDPI AARKVQKADR EKLRRDRLNE 60 HFLELGNALD PDRPKNDKAT ILTDSIQMLK ELTAQVDKLK AEYTALSEES RELTQEKNEL 120 REEKASLKSD IENLNAQYQQ RVRVMFPWTA IDPSSVVMGP PYTYPMPVPI PPGPIPFHPS 180 SQPFSFFGGQ NPGPIPNPCP AFVPYPTPAN PANPAVEQPA SQYASTSHIS GKQDLKSKDQ 240 QRGSSVERCD GSNDVATDLE LKMPGSSAQQ DSSSSGGRKG KQSQREERTT TDGSLSSRYS 300 SQVHQDSSSN SVSDVPKS

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010113346.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010113346.1	0.0	transcription factor bHLH121
Swissprot	Q9LT23	1e-81	BH121_ARATH; Transcription factor bHLH121
TrEMBL	W9SCR1	0.0	W9SCR1_9ROSA; Uncharacterized protein
STRING	XP_010113346.1	0.0	(Morus notabilis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF2282	33	76

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19860.1	9e-66	bHLH family protein

Link Out ? help Back to Top
Entrez Gene	21409323

Publications ? help Back to Top
Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470] Min JH, et al. Arabidopsis Basic Helix-Loop-Helix 34 (bHLH34) Is Involved in Glucose Signaling through Binding to a GAGA Cis-Element. Front Plant Sci, 2017. 8: p. 2100 [PMID:29321786]