PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010111674.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family bHLH
Protein Properties Length: 349aa    MW: 37632.3 Da    PI: 4.9933
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010111674.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.63e-102713111055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r+RR+riN+++  L+ l+P+      +K++ +++Le+Av+Y++ Lq
  XP_010111674.1 271 RKRRERINERLRILQNLIPNG-----TKVDISTMLEEAVQYVQFLQ 311
                     9******************97.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.02E-14260326IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.027261310IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.3E-12266321IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.3E-11267316IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.19E-12270315No hitNo description
PfamPF000101.6E-7271311IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    Send to blast
MEAMGAEGQW TSLSGIYTAE EADFMASLLN NSVLYYNNQL LSGMGTNLPS FWPGHESTAN  60
MAGNYGASHC SLELSNSSFS SFSRGNSSAT SGDNSSVFPT SSNEHYCLST DDHSHKNPST  120
NNCSMPFDFG VGDLKTTTSY LVEGDREDRV NGDEIGDGSE DVAPEKSTPS DENSEKRPRC  180
SENVEVGKRH AKSKKKQKLA SIINIDGNAG VNNGQSSSSC CSGDESINGG QEMSGGDTSS  240
LSPKGPAALY SDGKARARRG SATDPQSLYA RKRRERINER LRILQNLIPN GTKVDISTML  300
EEAVQYVQFL QLQIKLLSSD ELWMYAPIAY NGKDIGLDHS KLALAAKQS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1190196AKSKKKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010111674.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010111674.10.0transcription factor bHLH84
TrEMBLW9S8K50.0W9S8K5_9ROSA; Transcription factor bHLH85
STRINGXP_010111674.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF80733121
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.13e-40bHLH family protein