PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010111014.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family bHLH
Protein Properties Length: 484aa    MW: 52681 Da    PI: 6.5061
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010111014.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.71.4e-053734101254
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  XP_010111014.1 373 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIEYIKFL 410
                     677888999*******998.....8****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.973361410IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.49E-11371423IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.46E-6371415No hitNo description
Gene3DG3DSA:4.10.280.101.2E-8375418IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042631Biological Processcellular response to water deprivation
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071472Biological Processcellular response to salt stress
GO:2000214Biological Processregulation of proline metabolic process
GO:2000377Biological Processregulation of reactive oxygen species metabolic process
GO:0005634Cellular Componentnucleus
GO:0001046Molecular Functioncore promoter sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 484 aa     Download sequence    Send to blast
MAEEFQGGIC GGNWWSSSRS VFMAASPCSV GLSHDVAGFG WPSHDMVDIK LARSSPGDTN  60
SVCDSTSNNN IHSGFQEVQK PQYQSHDNIN SVSGSGSSVL IDSTAQMMGF SLSTSDLNQS  120
NNNFLNSGRA ESNNIYSMLQ EDMGTKLNYR QEIGLLDSSS TQIPKDFSGN CSTVTTSQAL  180
SAGLPVSSSP SYVYGSSTTA TLLQSLFDDE AHHDHQLPQQ NSFSNNNRPI NYNNSSSTPV  240
NYGSNNCNNN MVSSSWPRFS APKQLQQQPG GLHFSNNTPF WNASEAAGQN NNNIIGRAGL  300
FTSLPQQLQY VTPFEEKPKC NNFTTTKPNE DVQDSGSVVK KSSSGSIGDH HQQPVLKRAR  360
IETPSPLPTF KVRKEKLGDR ITALQQLVSP FGKTDTASVL HEAIEYIKFL HDQVSVLSTP  420
YMKNGASNIQ VQQQGSIKPK DQEISPKQDL KSRGLCLVPI SSTFPVANET TTDFWTPTFG  480
GTFR
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010111014.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024030962.10.0transcription factor bHLH112 isoform X4
TrEMBLW9SHB60.0W9SHB6_9ROSA; Uncharacterized protein
STRINGXP_010111014.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF111833106
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.13e-58bHLH family protein