PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010107958.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family B3
Protein Properties Length: 867aa    MW: 96931.8 Da    PI: 6.5137
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010107958.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B341.52.3e-13520607297
                     EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                     +k +++s+v+   +l l+kkf++ h+ k   +++ +ledesg++   k+     +  + l++GW+ F  a++L egD+vvF+l++ ++f  +v +
  XP_010107958.1 520 VKYMLHSHVTGGFWLGLSKKFCDLHMPK--HDTMFVLEDESGQVSVAKY--LAEK--VGLSGGWRAFSIAHKLVEGDVVVFQLVSPTKF--KVYI 606
                     578999****************999744..6679***************..4444..55***********************9987777..6666 PP

                     E CS
              B3  97 f 97 
                     +
  XP_010107958.1 607 I 607
                     5 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.18203.1E-631144IPR029058Alpha/Beta hydrolase fold
SuperFamilySSF534742.48E-1035266IPR029058Alpha/Beta hydrolase fold
PfamPF057057.7E-37130377IPR008547Protein of unknown function DUF829, TMEM53
Gene3DG3DSA:3.40.50.18203.1E-6196267IPR029058Alpha/Beta hydrolase fold
Gene3DG3DSA:2.40.330.102.8E-17513611IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019362.75E-20514610IPR015300DNA-binding pseudobarrel domain
CDDcd100171.31E-21517607No hitNo description
PROSITE profilePS5086310.461519610IPR003340B3 DNA binding domain
SMARTSM010191.3E-15519610IPR003340B3 DNA binding domain
PfamPF023626.5E-11520607IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 867 aa     Download sequence    Send to blast
MAAGAGGGGV YWGRKEVSDF KGVVVLFSWV SIHENHLKNF VDLYASLGWN SLVCHAQFVD  60
AFYPERAMSS AFVVLNELVE ELRVKPCPVV FAAFSGGTKA SMYKVFQIIE GISESQLYPG  120
EYRLVRNCIS GNIFDSSPVD FTSDLGTRYA LHPTILKVPG SSKLVSWVAK GIASGLDALY  180
LTRFESQRTE YWQALHSSVN FGAPFLILGS EKDDLAPYHI ICNFTQRLQE LGGDVKLVKL  240
KGSPHIGHYE HYPIQYRAAV TDLLERAALV FSQKMQQLED ERTCMESTND EISALICDLQ  300
KAAVNSNQSL RRVAVGPSDH FYLPSSAEHQ TGRDSEPSQD ELKDKPVHLP SPPSINAHSV  360
LGELLFDACV PKNVEGWDIK FCGSLNGQPF ASARRHSPFH GMMIYINGNE VYVDSRFRHS  420
WLETCRFGLK VVIFELLFSP EAMAVAQGRQ TPEADSSPKN KRGRPVKNEE KRKVCFNAKK  480
PESKKTKITV KRTSPDYSSS TLERAKDVQA NLAPEFPSLV KYMLHSHVTG GFWLGLSKKF  540
CDLHMPKHDT MFVLEDESGQ VSVAKYLAEK VGLSGGWRAF SIAHKLVEGD VVVFQLVSPT  600
KFKVYIIGSK CSDEVDCALG LLKLETRPKK AETGDMNALE RETESLELLL EGNPDDNIQK  660
TRSDMSVQYG KDSEDIRPEV LDGIKFSDSV IPFEEMRSID EFDITANGLI INSELPQYLH  720
GKYYELCCSQ KAFLHKHLID GLNCKLVAGI ILETTNIANA IRASKITTPV DDFATWDKTL  780
KAFEGLGMKI EFLRDRLDGL INLASESKKY ENVKVERDSV KEELGVLEAK VLAVKGRMTR  840
LDTEFEALGM NYQELEVMFR KVATAPW
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010107958.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLW9RYD50.0W9RYD5_9ROSA; B3 domain-containing protein
STRINGXP_010107958.10.0(Morus notabilis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.18e-37B3 family protein