PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010107942.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ERF
Protein Properties Length: 316aa    MW: 34877.5 Da    PI: 6.1003
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010107942.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.32.5e-20152201255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr+++ +g+W+AeIrdp+    r +r++lg+f taeeAa+a+++a+  ++g
  XP_010107942.1 152 NYRGVRQRP-WGKWAAEIRDPR----RaTRVWLGTFNTAEEAARAYDKAAIDFRG 201
                     59*******.**********82....48**********************98887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.34E-34151209No hitNo description
SMARTSM003801.3E-38152215IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.9E-33152209IPR001471AP2/ERF domain
PROSITE profilePS5103225.146152209IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-22152210IPR016177DNA-binding domain
PfamPF008472.7E-14152201IPR001471AP2/ERF domain
PRINTSPR003673.1E-12153164IPR001471AP2/ERF domain
PRINTSPR003673.1E-12175191IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0001944Biological Processvasculature development
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0050832Biological Processdefense response to fungus
GO:0051301Biological Processcell division
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    Send to blast
MSPKRQNLSE SPPPPFSASY PPPPPPAPPA TRRLLTHDQE FSIMVSTLRN IVSGNDSASA  60
APEFLQFPLF ADAMISGGDN NNQFRAEDLD TCQVCGLDIE RCLGCKLFSP ISSSPQNHNE  120
MTMINANNNN NHISSGSSNS RPAPRKRMGK KNYRGVRQRP WGKWAAEIRD PRRATRVWLG  180
TFNTAEEAAR AYDKAAIDFR GPRAKLNFPF PDTSLRTNVQ SNAINASTSS INTAEEVRLH  240
AAMPAAQEQE SSENPSSSGL MSAHADDHIR FDSMDIEKDL QSSSDFWDED IHKWLMDFSG  300
DHSSDSGNGS GIFNYS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-22151210161ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00469DAPTransfer from AT4G34410Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010107942.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010107942.20.0ethylene-responsive transcription factor ERF109
TrEMBLW9RY640.0W9RY64_9ROSA; Ethylene-responsive transcription factor
STRINGXP_010107942.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF29623072
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.11e-30redox responsive transcription factor 1