PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010104968.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family WRKY
Protein Properties Length: 348aa    MW: 38867 Da    PI: 5.0769
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010104968.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.56.6e-29128188259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     dDgy+WrKYGqK++ g+++prsYYrCt++   +C+++k+v+rs+edp ++eitY+g+H+++
  XP_010104968.1 128 DDGYSWRKYGQKDILGAKYPRSYYRCTFRntqSCWATKQVQRSDEDPYLFEITYRGTHTCS 188
                     8**************************998889**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.5E-28121189IPR003657WRKY domain
PROSITE profilePS5081121.953122185IPR003657WRKY domain
SuperFamilySSF1182901.44E-25126189IPR003657WRKY domain
SMARTSM007748.8E-39127189IPR003657WRKY domain
PfamPF031063.0E-26128187IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    Send to blast
MEGSCSWEQK TLIGELIQGM ELAKQLRQNL GVKSSAETRE FLVQRILSSY EKALLILKWG  60
GSMGQQQPQA LGVATNLPVP ESPMSVNESP RSDDQDLIRD GSKKRKVLPR WTDQVRVSSE  120
NGLEGPQDDG YSWRKYGQKD ILGAKYPRSY YRCTFRNTQS CWATKQVQRS DEDPYLFEIT  180
YRGTHTCSQA SNSVQPPTSP QNHDQKPNNH NSIIPQQQQF GHCSHKLPSN LRVVTELGES  240
AFTFPSSQYG GLNGEDGFSP LVLESETFMG SFSRSFVSPA TPESGYYAPF QMNNSAGLQY  300
VHRSESDLTE IISANTSATN SPIPDMDFSL DSVDIDPNFP FDTPGFFS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A1e-18128187968OsWRKY45
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010104968.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010104968.10.0probable WRKY transcription factor 53
TrEMBLW9RQ800.0W9RQ80_9ROSA; Putative WRKY transcription factor 41
STRINGXP_010104968.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49334157
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.11e-73WRKY family protein