PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010102144.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family WRKY
Protein Properties Length: 380aa    MW: 42327.1 Da    PI: 6.7314
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010102144.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY105.33.2e-33226283259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dgy+WrKYGqK vk+s++prsYYrCt+++C+vkk+vers +dp++v++tYeg+Hnh+
  XP_010102144.1 226 EDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSFQDPSIVITTYEGQHNHH 283
                     8********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.3E-34210285IPR003657WRKY domain
SuperFamilySSF1182904.45E-29218285IPR003657WRKY domain
PROSITE profilePS5081132.053220285IPR003657WRKY domain
SMARTSM007748.6E-39225284IPR003657WRKY domain
PfamPF031065.7E-26226283IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    Send to blast
MSNDHQESTH DPHRPYNNDP FTYNTHDFID RFPFLNNYMN NSSIFYTQYP NSNSNNLDPN  60
SYLSYADCLH GSSMDHYNTL SRAFDMSCAA SSSDVVSAAQ IDHPHDIDST ATTAPAAAAA  120
ANNNLLKVAA GVGDQSAGTS ENPSTPNSSI SSSSNEAGAV VEEDSGKSKK LEEDKMQRKD  180
QSDDQDGDDV EDKGASKKVT KTKKKEKRQR EPRFAFLTKS EIDHLEDGYR WRKYGQKAVK  240
NSPYPRSYYR CTTQKCTVKK RVERSFQDPS IVITTYEGQH NHHCPATLRG SAAAMLSPSL  300
FASAAASVGP ALPVHDFFTQ FLPINANNNH HNHNHNHNQG EASSILYSNL SQQYRQQLQV  360
PDFGLLQDLV PSFSRHKQDP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A7e-292182861078Probable WRKY transcription factor 4
2lex_A7e-292182861078Probable WRKY transcription factor 4
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1204209KEKRQR
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00440DAPTransfer from AT4G18170Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010102144.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT8276564e-55KT827656.1 Manihot esculenta WRKY transcription factor 81 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010102144.10.0probable WRKY transcription factor 71 isoform X1
TrEMBLW9RHT30.0W9RHT3_9ROSA; Putative WRKY transcription factor 28
STRINGXP_010102144.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22313483
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29860.12e-49WRKY DNA-binding protein 71