PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010101882.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
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Family | NAC | ||||||||
Protein Properties | Length: 183aa MW: 20969.4 Da PI: 4.9785 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 32 | 3.7e-10 | 17 | 70 | 1 | 51 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleev..ikevdiykvePwdLp.kkv 51 lp+G+rF Ptdeel+ +yL++++ + +l+++ + i+ d+y + P++++ + + XP_010101882.1 17 LPVGYRFLPTDEELMAFYLRNRILDLPLPVTYIrdIDCKDLYGSPPSNIErRGM 70 799************************88833223555589*******983333 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.57E-12 | 11 | 66 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.0E-5 | 18 | 51 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 183 aa Download sequence Send to blast |
MENSHRRSES EATLVKLPVG YRFLPTDEEL MAFYLRNRIL DLPLPVTYIR DIDCKDLYGS 60 PPSNIERRGM GVGQNEKRRI LQELRFVIAT CIMAAGHLSP RANPPCRHRE GRGSSQDLPT 120 RRPIEEEADL VGPCKSEKLH AGSVRTDDGT ERCCEGMGGG EREKDERDEE RETEREKEDE 180 ERE |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010101882.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | W9RGM0 | 1e-129 | W9RGM0_9ROSA; Uncharacterized protein | ||||
STRING | XP_010101882.1 | 1e-130 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF14439 | 12 | 18 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62380.1 | 7e-09 | NAC-domain protein 101 |
Link Out ? help Back to Top | |
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Entrez Gene | 21398567 |