PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010099577.1
Common NameDREB6D
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ERF
Protein Properties Length: 440aa    MW: 49260.2 Da    PI: 5.9469
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010099577.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.15.1e-19198248256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+f+tae+Aa a+++ + kl+ge
  XP_010099577.1 198 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAAMAYDREAYKLRGE 248
                     59******9.**********955...5**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.58E-31197257No hitNo description
SMARTSM003802.7E-39198261IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.8E-32198256IPR001471AP2/ERF domain
SuperFamilySSF541719.15E-23198256IPR016177DNA-binding domain
PROSITE profilePS5103222.932198255IPR001471AP2/ERF domain
PRINTSPR003677.7E-11199210IPR001471AP2/ERF domain
PfamPF008473.8E-12199248IPR001471AP2/ERF domain
PRINTSPR003677.7E-11221237IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009651Biological Processresponse to salt stress
GO:2000070Biological Processregulation of response to water deprivation
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 440 aa     Download sequence    Send to blast
MAAAKNSGKF KKIETTRREV WEIDNAKDDD DDHHHLGFSN FEYSPHQWKP VLDEASVSER  60
PLKKIKSPER TSTSSSSSSS FSSVPITTTS LCPPNFPFAY DTSQQFPIFR PQQSVPHPQQ  120
QQQNQMISFA SDQQQSMNYP FLFQPQRQQQ LLQYWSDALN LSPRGRMMMM MGGFGPDGRP  180
LFRPPAAAAV QPINTTKLYR GVRQRHWGKW VAEIRLPRNR TRLWLGTFDT AEDAAMAYDR  240
EAYKLRGENA RLNFPELFLN KDNNNNNNNN KSESAGPSST VSSPPTPQAS SRQISTRQSS  300
QASDSERMPQ PPQSLQPPQG DNSGADDEAQ VAPAGGEAAA ATAQQAQELV WGEEMAEAWL  360
NAIPAGWGPG SPVWDDLDAN NNLLLQSNDL PFVANPNNNN QQPPNDPQEI HRQLQRLDSS  420
SASSPSSSCP MKRFFWKDQD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-19197255160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010099577.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF6783880.0KF678388.1 Morus notabilis dehydration responsive element binding transcription factor (DREB6D) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010099577.10.0ethylene-responsive transcription factor ERF054
TrEMBLW6FTF40.0W6FTF4_9ROSA; Dehydration responsive element binding transcription factor
STRINGXP_010099577.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF42683258
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.14e-41ERF family protein