PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010098235.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family bHLH
Protein Properties Length: 301aa    MW: 32785.6 Da    PI: 6.6837
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010098235.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.31.8e-10165212455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  XP_010098235.1 165 SHSLAERARREKISERMKMLQDLVPGC----NKVIGKALVLDEIINYIQSLQ 212
                     8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.67E-10159216No hitNo description
SuperFamilySSF474597.2E-17159226IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.4E-17161220IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.764161211IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.9E-8165212IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.1E-11167217IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    Send to blast
MDPLALMNAD SFPNANAASY NLAENWPFPI NGAGVGDPGG GLGLRRPQFG QSLAPFGDVL  60
VVNRDVSGND PMSLDQRGNH GGARKRRDVV EDDSPKGVST SSGNGVNDCD GKRLKTLGCK  120
EENHESKAEA ELSAGKPAEQ NARPPEPPKQ DYIHVRARRG QATDSHSLAE RARREKISER  180
MKMLQDLVPG CNKVIGKALV LDEIINYIQS LQRQVEDLSF SLTVYRISQF LSMKLEAVNS  240
RMNPGIEVFP SKDVNLASQY GQQTFEAAGM AFGSQPARDF SRGSSPEWLH MQVGGGFERT  300
T
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010098235.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFQ3807416e-63FQ380741.1 Vitis vinifera clone SS0ACG35YM08.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024022584.10.0transcription factor BHLH089
RefseqXP_024022585.10.0transcription factor BHLH089
SwissprotQ69WS37e-76BH094_ORYSJ; Transcription factor BHLH094
TrEMBLW9R6V00.0W9R6V0_9ROSA; Uncharacterized protein
STRINGXP_010098235.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF117134105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.13e-85BIG PETAL P