PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010097859.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family WRKY
Protein Properties Length: 405aa    MW: 44928.1 Da    PI: 6.4243
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010097859.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.57.6e-30137198159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDg++WrKYGqK++ g+++pr+YYrCt++   gC ++k+v+rs+edp+++eitY+g+H+++
  XP_010097859.1 137 LDDGFSWRKYGQKDILGAKYPRGYYRCTHRnvqGCLATKQVQRSDEDPNIFEITYRGRHTCT 198
                     59***************************98999**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081123.192132195IPR003657WRKY domain
Gene3DG3DSA:2.20.25.806.9E-29134199IPR003657WRKY domain
SuperFamilySSF1182903.66E-26136199IPR003657WRKY domain
SMARTSM007741.9E-42137199IPR003657WRKY domain
PfamPF031063.0E-27138197IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 405 aa     Download sequence    Send to blast
METKVGDWEQ KNLVNELTRG KEVARQLQMH LNNGTSASQE TREYLVQKIL VSYEKALSML  60
TWTTSSPAGD HLQPQPSPGV SGLMSESPPS LNGSPRSDQD SDRDQEHRDY ASRKRKILPR  120
WTQQVRVNPG MGLEGPLDDG FSWRKYGQKD ILGAKYPRGY YRCTHRNVQG CLATKQVQRS  180
DEDPNIFEIT YRGRHTCTQA SHVPSPILAS PERNQDQVPP IELPHDHHQQ NNIIINQQQI  240
TTVLQDPYHD HALSNFRSGL KVVTEGLDNR DDQPSFFHFA STSNVVDNVK SEGQSHGHST  300
FGTNSTMVGG FSPSTFVSPA TSGTNYFSVS QGAGNINDHD QFGLQQQHFH NESEIAEIIS  360
AVASSATGTQ TVGNYIPFGS HGHQGTSTGG DHFDSNFSFD NSGFF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B1e-191391951874Disease resistance protein RRS1
5w3x_D1e-191391951874Disease resistance protein RRS1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010097859.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010097859.10.0probable WRKY transcription factor 53
TrEMBLW9R5I70.0W9R5I7_9ROSA; Putative WRKY transcription factor 53
STRINGXP_010097859.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49334157
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.14e-63WRKY family protein