PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010097397.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family MYB_related
Protein Properties Length: 88aa    MW: 10009.5 Da    PI: 10.7792
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010097397.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.94e-173279148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g WT+e+de l+ ++k++G g+W t +++ g+ R++k+c++rw +yl
   XP_010097397.1 32 KGTWTPEDDEVLATYIKRHGEGHWGTLPEHAGLLRCGKSCRLRWVNYL 79
                     799*****************************99************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.4E-212487IPR009057Homeodomain-like
PROSITE profilePS5129420.1832783IPR017930Myb domain
SuperFamilySSF466896.06E-172787IPR009057Homeodomain-like
SMARTSM007173.3E-123181IPR001005SANT/Myb domain
PfamPF002495.9E-153279IPR001005SANT/Myb domain
CDDcd001675.69E-103479No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 88 aa     Download sequence    Send to blast
MIRNPSSFGH NYFSSSKQKS KTPCGRKVGI KKGTWTPEDD EVLATYIKRH GEGHWGTLPE  60
HAGLLRCGKS CRLRWVNYLR PSIKRGPI
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that may play a role in flower development by repressing ANT (PubMed:19232308). Regulates the transition of meristem identity from vegetative growth to flowering. Acts downstream of LFY and upstream of AP1. Directly activates AP1 to promote floral fate. Together with LFY and AP1 may constitute a regulatory network that contributes to an abrupt and robust meristem identity transition (PubMed:21750030). {ECO:0000269|PubMed:19232308, ECO:0000269|PubMed:21750030}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010097397.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010097400.13e-47transcription repressor MYB5
SwissprotQ9M2D97e-30MYB17_ARATH; Transcription factor MYB17
TrEMBLW9RSX94e-59W9RSX9_9ROSA; Myb-related protein Myb4
STRINGXP_010097397.17e-60(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3134817
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61250.13e-32myb domain protein 17