PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010097236.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ERF
Protein Properties Length: 261aa    MW: 29111.4 Da    PI: 6.5121
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010097236.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.24.9e-19453154
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkle 54
                    ++++GVr+++ +g+Wv+eIr+p        kr++lg+f tae+Aa+a+++a+  + 
  XP_010097236.1  4 KKFRGVRRRH-WGSWVSEIRHP-----LlkKRVWLGTFETAEDAARAYDEAAILMS 53
                    59*****998.**********8.....335*********************98776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.60E-33464No hitNo description
PfamPF008471.8E-11552IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.1E-32562IPR001471AP2/ERF domain
PROSITE profilePS5103222.168562IPR001471AP2/ERF domain
SuperFamilySSF541719.81E-21564IPR016177DNA-binding domain
SMARTSM003807.1E-39568IPR001471AP2/ERF domain
PRINTSPR003673.1E-10617IPR001471AP2/ERF domain
PRINTSPR003673.1E-102844IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009414Biological Processresponse to water deprivation
GO:0010143Biological Processcutin biosynthetic process
GO:0010166Biological Processwax metabolic process
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    Send to blast
MEQKKFRGVR RRHWGSWVSE IRHPLLKKRV WLGTFETAED AARAYDEAAI LMSGRNAKTN  60
FPINTTSLPL TSSDNINDHI KYSTLNSSLA NINNITTTTT ITTTNMSSTS SSSSAFSAVL  120
SAKLRKCCKI PSPSLTCLRL DTKNSHIGVW QKRAGPRSDS NWVMMVEIAT SKNNNNDDDN  180
NNNINMSNNN NNLMQHDQYD WPPAHNDIAA DAYDDHIGRE PAMAATAPEL GGDEHGLMMD  240
GEKEEKLVTL QMIEELLNSN N
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-17463161ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A2e-17467468ATERF1
3gcc_A2e-17467468ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010097236.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024021921.11e-125ethylene-responsive transcription factor WIN1
TrEMBLW9R4350.0W9R435_9ROSA; Ethylene-responsive transcription factor WIN1
STRINGXP_010097236.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF57633144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.14e-55ERF family protein