PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010096931.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family HD-ZIP
Protein Properties Length: 819aa    MW: 90567.6 Da    PI: 5.5982
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010096931.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.84.4e-1994149156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t+ q++e+e+lF++ ++p+ ++r +L++ lgL+ rqVk+WFqNrR+++k
  XP_010096931.1  94 KKRYHRHTARQIQEMEALFKEFPHPDDKQRMKLSQDLGLKPRQVKFWFQNRRTQMK 149
                     688899***********************************************998 PP
2START158.35.9e-502915202206
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.................SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S... CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskv................dsgealrasgvvdmvlallveellddkeqWdetla... 77 
                     la +  +elvk+ ++++p+W +    eng evl  +e ++                 +++ea r+s+vv+m++ +lv  +ld + +W   ++   
  XP_010096931.1 291 LAMSSVNELVKMCQSGHPLWIRKG--ENGREVLNVEEHARMfpwplnhdlkqngaseFRTEATRDSAVVIMNSITLVDAFLDAN-KWMDLFPsiv 382
                     5677899**************999..**********99888*******************************************.9999999999 PP

                     .EEEEEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE..TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEE CS
           START  78 .kaetlevissg......galqlmvaelqalsplvp.RdfvfvRyirq.lgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghsk 163
                      +a+tl+viss+      g lqlm+ael ++splvp R+  f+Ry++q  ++g+w+ivd  +ds  +   ++s+ R +++pSg++i++++ng+s+
  XP_010096931.1 383 sRAKTLQVISSDasgqasGSLQLMFAELEFPSPLVPtREANFLRYCQQnAEEGSWIIVDYPIDSFHDILHQPSLPRYKRRPSGCVIQDMPNGYSR 477
                     9****************************************************************99877************************* PP

                     EEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 164 vtwvehvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     vtw+eh++ +++ +++++ ++v+sg+a+ga++w+a lqrqce+
  XP_010096931.1 478 VTWIEHAEIEEKPVQQIFSHFVHSGMAFGASRWLAVLQRQCER 520
                     *****************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.3E-1972149IPR009057Homeodomain-like
SuperFamilySSF466891.71E-1782152IPR009057Homeodomain-like
PROSITE profilePS5007117.10391151IPR001356Homeobox domain
SMARTSM003893.3E-1792155IPR001356Homeobox domain
PfamPF000461.6E-1694149IPR001356Homeobox domain
CDDcd000866.24E-1696152No hitNo description
PROSITE patternPS000270126149IPR017970Homeobox, conserved site
PROSITE profilePS5084844.696281523IPR002913START domain
SuperFamilySSF559619.34E-34282522No hitNo description
CDDcd088751.33E-116285519No hitNo description
SMARTSM002341.8E-35290520IPR002913START domain
PfamPF018523.9E-42291520IPR002913START domain
SuperFamilySSF559612.75E-16538717No hitNo description
SuperFamilySSF559612.75E-16753789No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0048497Biological Processmaintenance of floral organ identity
GO:0005634Cellular Componentnucleus
GO:0008289Molecular Functionlipid binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 819 aa     Download sequence    Send to blast
MYGDCQVMSS MGGNVVPSET LFSSPIQNPN FNFISTMPTF QPFSSVVPKE ENGLLLRGKE  60
EMLESGSGSE QMEDKSGNEQ ESADQQQLQQ QQKKKRYHRH TARQIQEMEA LFKEFPHPDD  120
KQRMKLSQDL GLKPRQVKFW FQNRRTQMKA QQDRADNAIL RAENETLKNE NYRLQAALRN  180
VICPNCGGPA IIGDICLDEQ QLRLENARLR EELDRVCCLT WRNTGRPMQG MEPQPPTLMP  240
PSLDLDMNIY SRHFPDPNTM VPVPMLPPEP SHFTVENGLL LEEEKSLAME LAMSSVNELV  300
KMCQSGHPLW IRKGENGREV LNVEEHARMF PWPLNHDLKQ NGASEFRTEA TRDSAVVIMN  360
SITLVDAFLD ANKWMDLFPS IVSRAKTLQV ISSDASGQAS GSLQLMFAEL EFPSPLVPTR  420
EANFLRYCQQ NAEEGSWIIV DYPIDSFHDI LHQPSLPRYK RRPSGCVIQD MPNGYSRVTW  480
IEHAEIEEKP VQQIFSHFVH SGMAFGASRW LAVLQRQCER VASLMARNIS DLGVIPSPEA  540
RKNMMNLAQR MIKTFCANIS TSGGQSWTAL SDSPDDTVRI TTRKITEPGQ PNGLILSAVS  600
TTWLPYPHNQ VFELLRDEHR RCQLEVLSNG NSLHEVAHIA NGSHPGNCIS LLRINVASNS  660
SQHVELMLQE SCTDQSGSLV VYSTMEVDAI QLAMSGEDPS CIRILPIGFS IIPVEPTAAV  720
ASPADGSSSS AAAASSSEAA AAAAAAAGSA KPSCLLTVGL HVLVSTIPSA KLSLPSVTAL  780
NNHLNNTVHQ IVAALGSTTT TTTNCTTENG STSLEEGLN
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010096931.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010096931.10.0homeobox-leucine zipper protein HDG5 isoform X1
RefseqXP_024021695.10.0homeobox-leucine zipper protein HDG5 isoform X1
SwissprotA2ZAI70.0ROC3_ORYSI; Homeobox-leucine zipper protein ROC3
TrEMBLW9RRM40.0W9RRM4_9ROSA; Homeobox-leucine zipper protein ROC3
STRINGXP_010096931.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF109463036
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46880.10.0homeobox-7