PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010096332.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family HD-ZIP
Protein Properties Length: 292aa    MW: 33207.5 Da    PI: 4.2655
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010096332.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.18.3e-2056109356
                     --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     k++++t++q+e Le+ F +++++  e++ +LAk+lgL+ rqV +WFqNrRa++k
  XP_010096332.1  56 KKRRLTANQVEFLEKNFDRENKLEPERKIQLAKELGLEPRQVAIWFQNRRARYK 109
                     56689************************************************9 PP
2HD-ZIP_I/II128.72.4e-4156147293
     HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                     kkrrl+++qv++LE++F++e+kLeperK +la+eLgl+prqva+WFqnrRAR+ktkqlEkdy+aLk++yd+lk + ++L ke e+L++e+++
  XP_010096332.1  56 KKRRLTANQVEFLEKNFDRENKLEPERKIQLAKELGLEPRQVAIWFQNRRARYKTKQLEKDYDALKASYDSLKCDYDNLLKESETLKNEVNS 147
                     9**************************************************************************************99975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466892.05E-1947113IPR009057Homeodomain-like
PROSITE profilePS5007117.42751111IPR001356Homeobox domain
SMARTSM003899.4E-1853115IPR001356Homeobox domain
CDDcd000866.90E-1754112No hitNo description
PfamPF000464.0E-1756109IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.601.4E-2058119IPR009057Homeodomain-like
PRINTSPR000317.0E-68291IPR000047Helix-turn-helix motif
PROSITE patternPS00027086109IPR017970Homeobox, conserved site
PRINTSPR000317.0E-691107IPR000047Helix-turn-helix motif
PfamPF021834.3E-17111152IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    Send to blast
MEVVQNSGSK SMVSFENVSK VEPREGPSFF QAAVDNEENG GGGDDDDEGC FHQPGKKRRL  60
TANQVEFLEK NFDRENKLEP ERKIQLAKEL GLEPRQVAIW FQNRRARYKT KQLEKDYDAL  120
KASYDSLKCD YDNLLKESET LKNEVNSLKE KLITKEKGKQ NMELENAISS SLEEPPENPI  180
VKTDSETLSN VPNVVCKQED ASSAKSDVLD SDDSPHYAEN FSSFLEPADS SHVFEPEQSD  240
FSQDEEDEMI MRKSFLPSPF LPKLEAYCYD DPCASSCGFG FQVEDQSFNF WP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1103111RRARYKTKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010096332.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010096332.20.0homeobox-leucine zipper protein HAT5
TrEMBLW9RPU70.0W9RPU7_9ROSA; Homeobox-leucine zipper protein HAT5
STRINGXP_010096332.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15003499
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.13e-46homeobox 1