PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010093425.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ERF
Protein Properties Length: 145aa    MW: 15874.4 Da    PI: 7.6548
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010093425.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.32.5e-201161255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                    +y+GVr+++ +g+++AeIrd +    + +r++lg+fgta+eAa+a+++a+ +++g
  XP_010093425.1 11 RYRGVRRRP-WGKYAAEIRDSTR---HgARVWLGTFGTADEAARAYDRAAYAMRG 61
                    6********.**********422...25*************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541718.5E-231170IPR016177DNA-binding domain
SMARTSM003803.1E-331175IPR001471AP2/ERF domain
PfamPF008471.4E-151161IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.4E-301171IPR001471AP2/ERF domain
PROSITE profilePS5103223.3141169IPR001471AP2/ERF domain
PRINTSPR003673.8E-111223IPR001471AP2/ERF domain
CDDcd000183.69E-121970No hitNo description
PRINTSPR003673.8E-113551IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    Send to blast
MDQDKDSGGV RYRGVRRRPW GKYAAEIRDS TRHGARVWLG TFGTADEAAR AYDRAAYAMR  60
GPLAILNFPE EYPLTAGSRY SSSSSFSSSS ISAASSSSSS TSMRGSGESS GSSQHGKQVI  120
ELEYLDDKVL EELLEYEEIK NNKKG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-341112914114Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010093425.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010093425.11e-101ethylene-responsive transcription factor ERF096
SwissprotQ9LTC55e-41ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLW9RFU71e-100W9RFU7_9ROSA; Ethylene-responsive transcription factor
STRINGXP_010093425.11e-100(Morus notabilis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G04370.14e-22Ethylene-responsive element binding factor 14
Publications ? help Back to Top
  1. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]