PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010091523.1

Organism

Morus notabilis

Taxonomic ID

981085

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus

Family

Nin-like

Protein Properties

Length: 345aa MW: 39963 Da PI: 5.6115

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010091523.1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	78.7	6.5e-25	161	210	3	52
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 k +s e lsky+++pi++AAkeL+v+lT+LK++CR++GI+RWPhRk+ sl XP_010091523.1 161 KMLSRELLSKYYYMPITQAAKELNVGLTLLKKRCRELGISRWPHRKLISL 210 78999*****************************************9886 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	17.154	148	230	IPR003035	RWP-RK domain
Pfam	PF02042	1.3E-20	163	210	IPR003035	RWP-RK domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0051302	Biological Process	regulation of cell division

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence Send to blast
METCWTMSNY EILAIDENPF MFPISQLPPF DFSGEYAGYY NNINLEYNWQ NELPIQESFL 60 LDAVPLMEYH SSTDHSFYGT MEPISTVIQD HEFFYGNGNG PALGVWDQDG RVGFGPEIHV 120 QQKPINHNGE TGKYLMTKEE RKGVKRCRSS SEEKNSNSTS KMLSRELLSK YYYMPITQAA 180 KELNVGLTLL KKRCRELGIS RWPHRKLISL QTLINNVQEL VKQEGVENES KLKNAIELLE 240 REKKLVEEVP DIQLEDTTKR LRQACFKANY KKRKLRIMES HESDFNKGKS SPHQYHHHHE 300 TMFCSSSSSS AYQIITVDQE EEDDQEVIKS LLSEDSFSSG NLLMF

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence Send to blast

METCWTMSNY EILAIDENPF MFPISQLPPF DFSGEYAGYY NNINLEYNWQ NELPIQESFL  60
LDAVPLMEYH SSTDHSFYGT MEPISTVIQD HEFFYGNGNG PALGVWDQDG RVGFGPEIHV  120
QQKPINHNGE TGKYLMTKEE RKGVKRCRSS SEEKNSNSTS KMLSRELLSK YYYMPITQAA  180
KELNVGLTLL KKRCRELGIS RWPHRKLISL QTLINNVQEL VKQEGVENES KLKNAIELLE  240
REKKLVEEVP DIQLEDTTKR LRQACFKANY KKRKLRIMES HESDFNKGKS SPHQYHHHHE  300
TMFCSSSSSS AYQIITVDQE EEDDQEVIKS LLSEDSFSSG NLLMF

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010091523.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024018219.1	0.0	protein RKD2
TrEMBL	W9QYQ3	0.0	W9QYQ3_9ROSA; Uncharacterized protein
STRING	XP_010091523.1	0.0	(Morus notabilis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF6184	30	52

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18790.1	3e-47	RWP-RK domain-containing protein

Link Out ? help Back to Top
Entrez Gene	21399028