PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010091212.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
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Family | TCP | ||||||||
Protein Properties | Length: 395aa MW: 41122.1 Da PI: 8.8579 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 38.1 | 5.4e-12 | 59 | 89 | 1 | 31 |
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaar 31 aa+k+++++++hTkv+gR+RR+R++a+caar XP_010091212.1 59 AAPKRTSTKDRHTKVDGRGRRIRMPATCAAR 89 689**************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03634 | 4.0E-8 | 64 | 89 | IPR005333 | Transcription factor, TCP |
Pfam | PF03634 | 8.6E-4 | 89 | 228 | IPR005333 | Transcription factor, TCP |
Sequence ? help Back to Top |
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Protein Sequence Length: 395 aa Download sequence Send to blast |
MEAGGENGII RRPNFPLQLL EKKEHQEDHN SNTIEPCSSS APDPNPIRTL AQVEQSKKAA 60 PKRTSTKDRH TKVDGRGRRI RMPATCAARA EPAVIAATGT GTIPANFTSL NISLRSSGST 120 MSAPSQLIRA SNSYFNPNFS AAQLRTASPW ERSIFSPPDN SSNSNDSSNN NSSSSVLLNF 180 GSGNVSSMLQ GKQELQAMAA RDQSGFDHVT SSEGDAGVVR KRRQALEQDF SPTSTSATPQ 240 MGNYLLQSSA AGSIPASHSP IPATFWMMTN PGASGNNNNN SSNQGNMNSS GGSLVDPSWA 300 FPNAGNAAST VYRAGAIGSG LHLMNFPPMA LLPGQQLGSG NCGGGVGGGT VTDSHLGVLA 360 ALNGYRPILG SAASGPHQHH GGDDGHDTST TTSHR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 338 | 349 | SGNCGGGVGGGT |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010091212.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024018000.1 | 0.0 | transcription factor TCP14 | ||||
TrEMBL | W9QXS9 | 0.0 | W9QXS9_9ROSA; Uncharacterized protein | ||||
STRING | XP_010091212.1 | 0.0 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2120 | 32 | 80 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47620.1 | 8e-30 | TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 |
Link Out ? help Back to Top | |
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Entrez Gene | 21389957 |