PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010090287.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family bHLH
Protein Properties Length: 316aa    MW: 35424.3 Da    PI: 6.264
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010090287.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.31.5e-093986354
                    HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                      +  rE+ RRdr+N+ f eL  +l ++     +K++Ka+iL+ +++ +k+L
  XP_010090287.1 39 IQKADREKLRRDRLNDQFIELGNVLDPD----RPKNDKATILTDTIQLLKDL 86
                    56789*******************9997....79***************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.9823686IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.91E-73790No hitNo description
SuperFamilySSF474591.96E-1337105IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.3E-1237109IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.9E-73986IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.4E-74292IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    Send to blast
MNQLRHDDFL QSPPPSSSQP SSSQRPEADI KDCIAARKIQ KADREKLRRD RLNDQFIELG  60
NVLDPDRPKN DKATILTDTI QLLKDLTSQV NKLKAEYDIL TEESRELTQE KNDLREEKGS  120
LKSDIENLNV QYQQRVRTMF PWTAMDHSVI MATPSYPYPV PMPMPPGPIP MHPHMQPYPF  180
YGNHNPGVIP NPCSTFVPYI TPSTLVEQQS QQYVSPVMHP GNQSDVSGKQ DSRNKSSGES  240
KIERSEDSND VATNLELKTP GSATDQDLSS GQGKSPRSVR KENNVIERSS SSRCSSSRSV  300
QDSSSNSIVS SRNVND
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010090287.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010090287.10.0transcription factor bHLH121
SwissprotQ9LT237e-99BH121_ARATH; Transcription factor bHLH121
TrEMBLW9QSX00.0W9QSX0_9ROSA; Uncharacterized protein
STRINGXP_010090287.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22823376
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.13e-92bHLH family protein
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Min JH, et al.
    Arabidopsis Basic Helix-Loop-Helix 34 (bHLH34) Is Involved in Glucose Signaling through Binding to a GAGA Cis-Element.
    Front Plant Sci, 2017. 8: p. 2100
    [PMID:29321786]