PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010090260.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family CPP
Protein Properties Length: 750aa    MW: 82637 Da    PI: 5.719
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010090260.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR49.96.4e-16492529340
             TCR   3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 
                     +k+CnCk+skClk+YCeCfaag +C e C+C+dC Nk 
  XP_010090260.1 492 CKRCNCKRSKCLKLYCECFAAGLYCVEPCSCQDCLNKP 529
                     79**********************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM011142.6E-16490531IPR033467Tesmin/TSO1-like CXC domain
PROSITE profilePS5163418.232491584IPR005172CRC domain
PfamPF036382.7E-11493528IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 750 aa     Download sequence    Send to blast
MDTPVKSHST TTPFSSQFED SPVFNYISNL SPIEPVKSGH SNHTLNSLNF ASPPSVFTSP  60
QISSFSETRF SLRRHNLLDS SKTESSQSEI ENAIKTTEGV SLASQSEQLG HLNSGNSARE  120
VNDEQPTENF ELAVEFPGTL KYDCGSPDDN PVPLSVVHRD VMLEAGETGA SLVQSVTDDS  180
KVGHCLFERE KDLRKISRVE QSKDLEGCDW VNVISDSNNL LRLDLPITKD HSEEQELGMV  240
DSGTISLVSN VLEDNSNHND RGKTVCIFPT GSSEQLGMKA PGIQPEGIVG VKETDQTPAM  300
LSSTLLNQLV VSNSSDLVDG KSQKYINSST TPSSQLHRTI RRRSLVFERA ESHKRKSICD  360
SIQSNNKAAT SDDKLALSGY SFSKLPGIGL HLNTLASTND GLVSNENWAS ESQLISTPRI  420
MKPCSLALPE VPPDNLERAL VPWDGETQVT ETTYQTSEYL VGEELKHTSP RNKRHVRNTL  480
CKSEQVGEDL ACKRCNCKRS KCLKLYCECF AAGLYCVEPC SCQDCLNKPI HENIVLETRK  540
QIESRNPLAF APKVIRSVDA VSEYGGGVGC SMGCRCVGCK NTFGQKDGDI GTEETEFKEP  600
KLETYQKHAH DVSLEMAKDQ DLPITPSEIG RPSNQQQLNF SRKPRTSLYS IGSSPQLGNR  660
ENREKISFES HLQMIPEDGT LETLESSCPQ TSGVKSTSPN SKRVSPPYRE FGSLTARRSG  720
RKLILRSIPA FPQLSSHHDS DGFPEEHSQF
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010090260.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAM4866294e-38AM486629.1 Vitis vinifera contig VV78X015144.6, whole genome shotgun sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024017323.10.0CRC domain-containing protein TSO1
RefseqXP_024017324.10.0CRC domain-containing protein TSO1
TrEMBLW9R6Q70.0W9R6Q7_9ROSA; Uncharacterized protein
STRINGXP_010090260.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26193375
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22780.15e-96Tesmin/TSO1-like CXC domain-containing protein