PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010089065.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family TALE
Protein Properties Length: 678aa    MW: 75394.5 Da    PI: 6.9331
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010089065.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox277.6e-094204571954
                     HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
        Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                     Fe   ++yps  ++  LA+++gL+ +qV++WF N R +
  XP_010089065.1 420 FEHflHPYPSDVDKHILARQTGLSRSQVSNWFINARVR 457
                     554459******************************88 PP
2BELL117.27.6e-38282352272
            BELL   2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                     + elqk+k+kLls+leeV++rYk y++q+++v+ssFeavag g+a++Y +lA+ka+SrhFrcLkd i++qi
  XP_010089065.1 282 FVELQKRKTKLLSMLEEVERRYKNYCDQMRAVVSSFEAVAGAGAATVYSALASKAMSRHFRCLKDGIVSQI 352
                     679*******************************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005747.0E-61214350IPR006563POX domain
PfamPF075262.4E-47220348IPR006563POX domain
PROSITE profilePS5007112.179398461IPR001356Homeobox domain
CDDcd000868.07E-11401462No hitNo description
SMARTSM003895.8E-9401465IPR001356Homeobox domain
SuperFamilySSF466894.71E-17402468IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.2E-27404467IPR009057Homeodomain-like
PfamPF059209.2E-18418457IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0048481Biological Processplant ovule development
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0009506Cellular Componentplasmodesma
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 678 aa     Download sequence    Send to blast
MGSSSVGFCY SDVSPHNPTI QTQFTQNQIQ EFGPNNPEML INLTTGMEMI GFSKNTNTTS  60
SSSSSAMWKG FNKPDHDHHG HHDHFTTSSS HHDQNLMVGP DHHHQSGPWQ AAADHHQNRF  120
LVDDSSLCVF PCEGNERPSQ GLSLSLSSTN PSSIGLQTFE LRQTNQTQDG FFAKSANIHQ  180
PAHQMIQSDH HNHHAFLGKS PNHLLLHPHQ QVSAGQAFHL RNSRYLGPAQ ELLSEFCSLG  240
TKQTELQKQK SSQKNKQLED QDDSNNNGAS SSKKQLLYSL EFVELQKRKT KLLSMLEEVE  300
RRYKNYCDQM RAVVSSFEAV AGAGAATVYS ALASKAMSRH FRCLKDGIVS QIQATRKAMG  360
EKDVAVPGTS RGETPRLRAL DQALRQQRAF QQMSMMESHP WRPQRGLPER SVSVLRAWLF  420
EHFLHPYPSD VDKHILARQT GLSRSQVSNW FINARVRLWK PMVEEMYVEE TKEPSDANNN  480
IGSSSDGVTM ELGDPSRQTS RNPPDQDQKP TVDQLVRIDS ECLSSIVINP DKTDMRSSSK  540
SLQIRPSMQV QRQQNFDRFS ETAFGTVELD FSSYNQHQPS TAGTVLYSND NANAIGFNNG  600
GGGGGGGVSL TLGLQQHAGA NHGVSLAFSP ASQSSLFYTR DHEIDECQPA VQYSLLDGEG  660
QNLPYRNLMG AQLLHDLA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A2e-15407465563Homeobox protein Meis2
3k2a_B2e-15407465563Homeobox protein Meis2
4xrm_A3e-15407465563Homeobox protein Meis2
4xrm_B3e-15407465563Homeobox protein Meis2
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPlays a major role in ovule patterning and in determination of integument identity via its interaction with MADS-box factors. Formation of complex with AG-SEP dimers negatively regulates the carpel identity process and favors the maintenance of ovule identity. BEL1-STM complex maintains the indeterminacy of the inflorescence meristem. Required, with SPL, for cytokinin-induced PIN1 expression in ovules (PubMed:22786869). {ECO:0000269|PubMed:12244239, ECO:0000269|PubMed:17693535, ECO:0000269|PubMed:22786869}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010089065.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010089065.20.0homeobox protein BEL1 homolog
SwissprotQ388971e-148BEL1_ARATH; Homeobox protein BEL1 homolog
TrEMBLW9QPI10.0W9QPI1_9ROSA; Homeobox protein BEL1-like protein
STRINGXP_010089065.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF46502030
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41410.11e-142TALE family protein
Publications ? help Back to Top
  1. Yamada T,Sasaki Y,Hashimoto K,Nakajima K,Gasser CS
    CORONA, PHABULOSA and PHAVOLUTA collaborate with BELL1 to confine WUSCHEL expression to the nucellus in Arabidopsis ovules.
    Development, 2016. 143(3): p. 422-6
    [PMID:26700684]
  2. Lozano-Sotomayor P, et al.
    Altered expression of the bZIP transcription factor DRINK ME affects growth and reproductive development in Arabidopsis thaliana.
    Plant J., 2016. 88(3): p. 437-451
    [PMID:27402171]