PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.O00688.1.p
Common NameLOC105956286, MIMGU_mgv1a022644mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family LBD
Protein Properties Length: 278aa    MW: 30535.6 Da    PI: 6.3065
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.O00688.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26085.85.9e-274107199
            DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqle 88 
                       +C++C++lr++Ca+dC l+p++      ++q++++ +++k++G++ +++l++a p++ ++++++sl+yeA+ r+ dPv+G++g++ ++++  +
  Migut.O00688.1.p   4 SCNGCRILRKGCAEDCSLRPCLqwiksSESQANATLFLAKFYGRAGLINLINAGPTHLHSEIFRSLLYEACGRIIDPVHGSLGLMCSGNWPRC 96 
                       6*********************9999777899************************************************************* PP

            DUF260  89 qlkaelallke 99 
                       q+++e +l+++
  Migut.O00688.1.p  97 QAAVESVLQGA 107
                       ***99988876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5089115.4913109IPR004883Lateral organ boundaries, LOB
PfamPF031956.0E-224102IPR004883Lateral organ boundaries, LOB
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    Send to blast
MRMSCNGCRI LRKGCAEDCS LRPCLQWIKS SESQANATLF LAKFYGRAGL INLINAGPTH  60
LHSEIFRSLL YEACGRIIDP VHGSLGLMCS GNWPRCQAAV ESVLQGAPLM MKVPGASDGE  120
ESASAAEPIF PLRGCDIRHL SKDSSSSAAA SLHRVRSRNR FKRSAASKSQ LNSFTAAEFM  180
GESEEEEKFT ITGWECREQE LLDMKNFSYE EMKRAHSHDS SVETVEPTLA NRVEQPVRLV  240
KPEPSQPCEL GLELTLGINP VHQAYISTVI EISDSES*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.O00688.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012835583.10.0PREDICTED: LOB domain-containing protein 40-like
TrEMBLA0A022REY60.0A0A022REY6_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8862494
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68510.11e-62LOB domain-containing protein 42