PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N02799.2.p
Common NameLOC105959281, MIMGU_mgv1a008799mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 363aa    MW: 39140.9 Da    PI: 6.1854
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N02799.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.62.9e-10209257355
                       HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +h+ +Er RR+ri +++  L+el+P +    +k   Ka +L + ++Y++sLq
  Migut.N02799.2.p 209 NSHSLAERVRRERISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 257
                       58**************************....999*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474595.37E-17204273IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.72E-11204261No hitNo description
PROSITE profilePS5088815.472206256IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.3E-16206274IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.5E-7209257IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.1E-10212262IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009637Biological Processresponse to blue light
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    Send to blast
MGSEEIGQRD SISRIMGSSD SMSENVAGMS ESFLVDHFHG SCWDPMISDN LGNSSIIPQN  60
EFVNPHYLVG NSSHLAHYTS DLGLVLDMVP KIPSFGSGSF SEMANSSFGQ INESGCHSNL  120
EDGLFGASLN GKRKRKVSPS VGGSCNKNVE EEKLKNQKTG NTCEFPKEDE KKNTGTKQGV  180
KQAKDGSNGA EPSKEDYILV RAKRGQATNS HSLAERVRRE RISERMRLLQ ELVPGCNKIT  240
GKAVMLDEII NYVQSLQQQV EFLSMKLATV NPELNVDIDR ILSKDLLHTR GGNATELGVG  300
PGFSPSHAFP GLLNGYAGPP PPFHPLPPNL WNSDLQSILQ MGFDPSPTGT GLGANGLSKT  360
EP*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00135DAPTransfer from AT1G10120Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N02799.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF3975681e-108EF397568.1 Sesamum indicum basic helix-loop-helix protein (bHLH) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012838797.10.0PREDICTED: transcription factor bHLH74
TrEMBLA0A022R8T20.0A0A022R8T2_ERYGU; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.11e-57bHLH family protein