PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.N02629.1.p | ||||||||
Common Name | MIMGU_mgv1a012221mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | Dof | ||||||||
Protein Properties | Length: 269aa MW: 28333.2 Da PI: 8.1904 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 125 | 2.5e-39 | 43 | 100 | 6 | 63 |
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 ++cprCdstntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rknk+sss Migut.N02629.1.p 43 QNCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSS 100 79****************************************************9875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 3.0E-24 | 38 | 92 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 29.273 | 43 | 97 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 2.3E-33 | 43 | 97 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 45 | 81 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 269 aa Download sequence Send to blast |
MAMDSSFSQE MGSQTLESMV VIGTKGNQEK KATNIRAGDQ LPQNCPRCDS TNTKFCYYNN 60 YSLSQPRYFC KSCRRYWTKG GTLRNVPVGG GCRKNKRSSS SSSSSKRSSI SQDEKIPSSP 120 NPNCFNIPTL CNYDSGNPNM PLGGGGGNVL ENPRGFHNLY YGIGDSGINL GMGISGGGGG 180 IFHEMGFDQE FGGGAITTST AKQEISGGGG GGESGGRGLW GFPWLQSGNV NAGGDGNYYM 240 GDLDSDRGGS WNGIASSNWH GLLNSPLM* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.N02629.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012838649.1 | 0.0 | PREDICTED: dof zinc finger protein DOF2.1 | ||||
TrEMBL | A0A022RBA1 | 1e-161 | A0A022RBA1_ERYGU; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA88 | 24 | 419 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28510.1 | 6e-33 | Dof family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.N02629.1.p |