PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N02180.1.p
Common NameLOC105950139, MIMGU_mgv1a010769mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 303aa    MW: 31676.6 Da    PI: 6.3699
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N02180.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.81.1e-09149193554
                       HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
               HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                       h+++Er RR++i +++  L+el+P+ +      K + a++L + v+Y+k L
  Migut.N02180.1.p 149 HSIAERLRREKIAERIRALQELVPNvN------KTDRAAMLDEIVDYVKFL 193
                       99***********************55......****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.44E-15142203IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.57E-12142198No hitNo description
PROSITE profilePS5088816.361144193IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.7E-15146203IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.6E-7149193IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.2E-11150199IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MANNPGETPS DDFLDQILAF PNYASGVESN FVGNEAPTAS MLLQLGSGGG SAQFGGLGIG  60
GGYGVGSGGG GGGGGFPLGL SLEQGKGGFN DASGSGKRFY RDDAVDSRAS SMKPGFHGQP  120
MANTVQTMAH PPANRPRVRA RRGQATDPHS IAERLRREKI AERIRALQEL VPNVNKTDRA  180
AMLDEIVDYV KFLKLQLKVL SMSRLGGAGA VAPLVTDIST LSMEEEGGNG GGRAQPAWEK  240
WSSDGTERQV AKLMEENVGA AMQFLQSKAL CMMPISLASA IYHTQPVTDA TSHVKPESDP  300
LS*
Functional Description ? help Back to Top
Source Description
UniProtRequired for ovule fertilization. {ECO:0000269|PubMed:15634699}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N02180.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012828911.10.0PREDICTED: transcription factor UNE12-like
SwissprotO227681e-112UNE12_ARATH; Transcription factor UNE12
TrEMBLA0A022PSU50.0A0A022PSU5_ERYGU; Uncharacterized protein
STRINGMigut.N02180.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA57992434
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.31e-92bHLH family protein
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]