PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.N01686.1.p

Common Name

LOC105952427, MIMGU_mgv1a006556mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

bHLH

Protein Properties

Length: 440aa MW: 49553.2 Da PI: 5.7319

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.N01686.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.8	3.5e-12	245	290	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h + E+ RR + + +f+ Lr+l+P++ +K++ a+i++ A++YI++L Migut.N01686.1.p 245 KHFATEKHRRVQFKGKFDDLRKLVPNP-----TKNDRASIVQDAIDYINEL 290 79***********************.....9*************998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	6.02E-14	239	305	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	13.96	241	290	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	1.41E-10	245	295	No hit	No description
Gene3D	G3DSA:4.10.280.10	1.9E-11	245	300	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	1.3E-9	245	290	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	2.4E-9	247	296	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence Send to blast
MYEQSSNFDP AMNLHEEERG IIGQNDVVNY PHENPKIAAM EMELHHQLNL EIEHCFNNGC 60 QQINNWQVEQ MNASFNLENH HNQNQNQNQD PIFNTTQYPT TTDLLNIFPF PKYPSLLSNS 120 SMSFSTHNKN SSNNNFLASL GLMGEINPNA GGDGTSASGS VIYDPLLPLN LPPQPPSLRD 180 LFHSLPNNYA KNGGCSLFGN VDERDNNNNH GNVGLMYQND NGVFEFTATG EIDCVGKNRD 240 GKDIKHFATE KHRRVQFKGK FDDLRKLVPN PTKNDRASIV QDAIDYINEL KRSVAELQLL 300 VEKKRCSRER MKRPKMENNE NENESNSLGN LESGSSLRSS WLQRKSKNTE VDVRIVDDEV 360 TVKLVQQKRI NCLLYVSKVL DELQLDLHHV AGGLIGDYYS FLFNSKICEG SIVYASAVAN 420 KLIEVVDKQY AAIPPSSSY*

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence Send to blast

MYEQSSNFDP AMNLHEEERG IIGQNDVVNY PHENPKIAAM EMELHHQLNL EIEHCFNNGC  60
QQINNWQVEQ MNASFNLENH HNQNQNQNQD PIFNTTQYPT TTDLLNIFPF PKYPSLLSNS  120
SMSFSTHNKN SSNNNFLASL GLMGEINPNA GGDGTSASGS VIYDPLLPLN LPPQPPSLRD  180
LFHSLPNNYA KNGGCSLFGN VDERDNNNNH GNVGLMYQND NGVFEFTATG EIDCVGKNRD  240
GKDIKHFATE KHRRVQFKGK FDDLRKLVPN PTKNDRASIV QDAIDYINEL KRSVAELQLL  300
VEKKRCSRER MKRPKMENNE NENESNSLGN LESGSSLRSS WLQRKSKNTE VDVRIVDDEV  360
TVKLVQQKRI NCLLYVSKVL DELQLDLHHV AGGLIGDYYS FLFNSKICEG SIVYASAVAN  420
KLIEVVDKQY AAIPPSSSY*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.N01686.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012831431.1	0.0	PREDICTED: transcription factor bHLH91-like isoform X1
TrEMBL	A0A022RP70	0.0	A0A022RP70_ERYGU; Uncharacterized protein
STRING	Migut.N01686.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2696	23	51

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31220.1	7e-71	bHLH family protein

Link Out ? help Back to Top
Phytozome	Migut.N01686.1.p
Entrez Gene	105952427