PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N01538.1.p
Common NameLOC105956293, MIMGU_mgv1a014821mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ERF
Protein Properties Length: 178aa    MW: 19876.1 Da    PI: 5.9393
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N01538.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.31.9e-183080155
               AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      + y+GVr ++ +g+Wv+eIr+p++   ++r++lg+f  +e+Aa+a++ a+ +l+g
  Migut.N01538.1.p 30 PVYRGVRKRR-WGKWVSEIREPKK---KTRIWLGSFPAPEMAARAYDVAAYCLKG 80
                      68*****887.**********854...6*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.2E-123080IPR001471AP2/ERF domain
SuperFamilySSF541711.44E-213190IPR016177DNA-binding domain
PROSITE profilePS5103223.5653188IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.7E-323189IPR001471AP2/ERF domain
SMARTSM003803.4E-363194IPR001471AP2/ERF domain
PRINTSPR003671.1E-123243IPR001471AP2/ERF domain
CDDcd000183.88E-313288No hitNo description
PRINTSPR003671.1E-127090IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    Send to blast
MEQQPPPCTN DDHHTAGGFS PKHRGSTRHP VYRGVRKRRW GKWVSEIREP KKKTRIWLGS  60
FPAPEMAARA YDVAAYCLKG QKAQLNFPQE IDHLPRPSTS TARDIQAAAS LAANMVAEEK  120
STDVHRGGEG DDDFWAEIEL PELMDNNNNN EYISEVWCWS CSNPGDATSI DIGDQIV*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-1829921276Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00120DAPTransfer from AT1G01250Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N01538.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012835591.11e-132PREDICTED: ethylene-responsive transcription factor ERF023-like
SwissprotQ1ECI26e-54ERF23_ARATH; Ethylene-responsive transcription factor ERF023
TrEMBLA0A022RGF51e-131A0A022RGF5_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA138741314
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01250.13e-56ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]