PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N01282.1.p
Common NameLOC105954607, MIMGU_mgv1a011162mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 291aa    MW: 32514.2 Da    PI: 7.2533
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N01282.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.75.8e-101261154
                      CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                      r++ +  rEr RRdr+N+ f eL   l ++     +K++Ka+iL  +++ +k+L
  Migut.N01282.1.p 12 RKVQKADRERLRRDRLNEQFTELGNALDPD----RPKNDKASILGDTIQMLKDL 61
                      5677889********************997....79****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.83E-14880IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.2E-131084IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.5351161IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.8E-81261IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.7E-81767IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MEAEPKNSNT ARKVQKADRE RLRRDRLNEQ FTELGNALDP DRPKNDKASI LGDTIQMLKD  60
LTSQVDRLKS EYSALTEESR ELTQEKNDLR EEKASLKSDI DNLNGQYQQR MRAMYPWGGM  120
DHSMVMHQSS YPYPMPVPVP TAPIAMHPSM QPYPFYGNQN PAVVPNPCST YVPYMTHNTM  180
IEQHVSQGVV QQQCTRSHAS SRQEPRHKSS DGESRIEKID DSNDITTDLE LKIPGSASEQ  240
DSSSKQRKAK KMVRKEASLT EGSSSSGCSS IHSVQAISSN SIVGGKKVND *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12025RLRRDR
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N01282.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012833724.10.0PREDICTED: transcription factor bHLH121
SwissprotQ9LT235e-90BH121_ARATH; Transcription factor bHLH121
TrEMBLA0A022RJP20.0A0A022RJP2_ERYGU; Uncharacterized protein
STRINGMigut.N01282.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA54562434
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.12e-81bHLH family protein
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Min JH, et al.
    Arabidopsis Basic Helix-Loop-Helix 34 (bHLH34) Is Involved in Glucose Signaling through Binding to a GAGA Cis-Element.
    Front Plant Sci, 2017. 8: p. 2100
    [PMID:29321786]