PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N01194.3.p
Common NameLOC105952088, MIMGU_mgv1a006218mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family B3
Protein Properties Length: 347aa    MW: 39026.4 Da    PI: 5.5
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N01194.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.64.6e-136791798
                      E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                       +p++f+++h   + +++t++l  e+ ++++ ++   k++    l++GWk F+  ++L egD vvF+l++  +f  +v ++r
  Migut.N01194.3.p  6 GVPRQFCDDHL--PMKDVTIVLIGENEKEFDTRYLAAKSG----LSGGWKFFAAGHKLIEGDAVVFQLIEPCKF--KVYIVR 79
                      58******994..34679****************555555....9***********************998888..777665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM010191.6E-6181IPR003340B3 DNA binding domain
PROSITE profilePS5086311.35181IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.102.4E-13679IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019363.34E-15679IPR015300DNA-binding pseudobarrel domain
PfamPF023625.2E-10679IPR003340B3 DNA binding domain
CDDcd100175.54E-15779No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    Send to blast
MHKNNGVPRQ FCDDHLPMKD VTIVLIGENE KEFDTRYLAA KSGLSGGWKF FAAGHKLIEG  60
DAVVFQLIEP CKFKVYIVRD RSLSEADGAI SLLNLDSNPD QIKPLKVEEP EENADIKETT  120
TTTSDKYPDP LVEDNNHPKK KKMKKIIRNT ENSNAEMSDR IKFSESPLDF KSVKCFQDFS  180
IHFNGLILDS EIPSHLKTKY YELCKSQNTF LHENLLQGLN SKLVAGMISE TVNIADAVRA  240
CKASTAHEHL ESWDRTLKAF EDLGMAVGPV RGRINELVSL YSEPRTRIIE SMRNQRDEAQ  300
VVIRGLSERL SIVRSCVEKL DADIDALEAK NESLGLVFEE IASAPW*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N01194.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012831049.10.0PREDICTED: B3 domain-containing protein Os01g0234100-like isoform X2
TrEMBLA0A022RSC40.0A0A022RSC4_ERYGU; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.17e-24B3 family protein