PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N01194.1.p
Common NameMIMGU_mgv1a006218mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family B3
Protein Properties Length: 453aa    MW: 51218.1 Da    PI: 6.7081
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N01194.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.83.1e-1696185198
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                       f+k +++s+v++  +l +p++f+++h   + +++t++l  e+ ++++ ++   k++    l++GWk F+  ++L egD vvF+l++  +f  +
  Migut.N01194.1.p  96 FVKLMSRSHVTQGFWLGVPRQFCDDHL--PMKDVTIVLIGENEKEFDTRYLAAKSG----LSGGWKFFAAGHKLIEGDAVVFQLIEPCKF--K 180
                       89**********************994..34679****************555555....9***********************998888..7 PP

                       EEEE- CS
                B3  94 vkvfr 98 
                       v ++r
  Migut.N01194.1.p 181 VYIVR 185
                       77665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.102.4E-1890185IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019364.32E-2191185IPR015300DNA-binding pseudobarrel domain
CDDcd100172.23E-2294185No hitNo description
PROSITE profilePS5086312.04196187IPR003340B3 DNA binding domain
PfamPF023621.2E-1396185IPR003340B3 DNA binding domain
SMARTSM010195.4E-1896187IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 453 aa     Download sequence    Send to blast
MAISSKNDSN RDPHSSSSSS KSKLKQKNTW EFKKQLVEKR LIDLDNMHKN NSDSVSMDKT  60
IVRHQSEEKS TTELHSSAMQ RADEIQKNLP KQFPSFVKLM SRSHVTQGFW LGVPRQFCDD  120
HLPMKDVTIV LIGENEKEFD TRYLAAKSGL SGGWKFFAAG HKLIEGDAVV FQLIEPCKFK  180
VYIVRDRSLS EADGAISLLN LDSNPDQIKP LKVEEPEENA DIKETTTTTS DKYPDPLVED  240
NNHPKKKKMK KIIRNTENSN AEMSDRIKFS ESPLDFKSVK CFQDFSIHFN GLILDSEIPS  300
HLKTKYYELC KSQNTFLHEN LLQGLNSKLV AGMISETVNI ADAVRACKAS TAHEHLESWD  360
RTLKAFEDLG MAVGPVRGRI NELVSLYSEP RTRIIESMRN QRDEAQVVIR GLSERLSIVR  420
SCVEKLDADI DALEAKNESL GLVFEEIASA PW*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N01194.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012831048.10.0PREDICTED: B3 domain-containing protein Os01g0234100-like isoform X1
TrEMBLA0A022RQ980.0A0A022RQ98_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30232343
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.11e-36B3 family protein