PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N01192.6.p
Common NameMIMGU_mgv1a007604mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family B3
Protein Properties Length: 366aa    MW: 42208.4 Da    PI: 7.8866
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N01192.6.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B355.79.1e-1818108196
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                       f k +  s+v ++  l+lpk f+++h  k  ++ ++++ de+ +s+++++ +r  ++r+ lt+GW++F  a+ L egD++vF+l++  +f  +
  Migut.N01192.6.p  18 FAKPMQISHVARKFELTLPKLFCDAHLPK--KDGMIVFLDENDQSYNINYVVRV-RDRFDLTGGWRSFSTAHALLEGDVLVFQLIEPCKF--K 105
                       7899999*******************534..3449***************6555.5699*************************998888..6 PP

                       EEE CS
                B3  94 vkv 96 
                       v +
  Migut.N01192.6.p 106 VYI 108
                       655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019361.43E-2111110IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.108.2E-2011110IPR015300DNA-binding pseudobarrel domain
CDDcd100171.05E-2216110No hitNo description
PROSITE profilePS5086313.26718112IPR003340B3 DNA binding domain
SMARTSM010191.1E-1418112IPR003340B3 DNA binding domain
PfamPF023622.3E-1518108IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    Send to blast
MNRAQTIQAN LSPHFPSFAK PMQISHVARK FELTLPKLFC DAHLPKKDGM IVFLDENDQS  60
YNINYVVRVR DRFDLTGGWR SFSTAHALLE GDVLVFQLIE PCKFKVYIVK DTRLTKVDGP  120
NRDRFHRKPI KAEPEEENSD PIERTRNKYL ERISQKTKTD RTTPIRKPAR DEYASYSDSF  180
GTERSLEYSL LGFKDFKDFS IYIDGLTIDS EIPTDCKEKY YGLCKSRNMF LHENLVQGLN  240
GKLAVEMISE TIRIADAIRA VDSKTAPGLM EGWDKTLKGF EEIGMVVGFL RVRIRKLIRV  300
FREYRAGIEL KRIERDEAEE ERIALNVKLW RVENWIGEID AEIDALSAKN ESMGPVLKEI  360
ACAPW*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N01192.6.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012831054.10.0PREDICTED: B3 domain-containing protein Os01g0234100-like isoform X3
TrEMBLA0A022RRP60.0A0A022RRP6_ERYGU; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.13e-25B3 family protein