PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.N01192.3.p | ||||||||
Common Name | MIMGU_mgv1a007604mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | B3 | ||||||||
Protein Properties | Length: 393aa MW: 45178.7 Da PI: 8.4264 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 55.5 | 1e-17 | 42 | 132 | 1 | 96 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f k + s+v ++ l+lpk f+++h k ++ ++++ de+ +s+++++ +r ++r+ lt+GW++F a+ L egD++vF+l++ +f + Migut.N01192.3.p 42 FAKPMQISHVARKFELTLPKLFCDAHLPK--KDGMIVFLDENDQSYNINYVVRV-RDRFDLTGGWRSFSTAHALLEGDVLVFQLIEPCKF--K 129 7899999*******************534..3449***************6555.5699*************************998888..6 PP EEE CS B3 94 vkv 96 v + Migut.N01192.3.p 130 VYI 132 655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.40.330.10 | 9.4E-20 | 35 | 134 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 1.63E-21 | 35 | 134 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 1.07E-22 | 40 | 134 | No hit | No description |
Pfam | PF02362 | 2.6E-15 | 42 | 132 | IPR003340 | B3 DNA binding domain |
PROSITE profile | PS50863 | 13.267 | 42 | 136 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 1.1E-14 | 42 | 136 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 393 aa Download sequence Send to blast |
MLEQGDSVST DRPYKRSFGL RSSAMNRAQT IQANLSPHFP SFAKPMQISH VARKFELTLP 60 KLFCDAHLPK KDGMIVFLDE NDQSYNINYV VRVRDRFDLT GGWRSFSTAH ALLEGDVLVF 120 QLIEPCKFKV YIVKDTRLTK VDGPNRDRFH RKPIKAAKTE PEEENSDPIE RTRNKYLERI 180 SQKTKTDRTT PIRKPARDEY ASYSDSFGTE RSLEYSLLGF KDFKDFSIYI DGLTIDSEIP 240 TDCKEKYYGL CKSRNMFLHE NLVQGLNGKL AVEMISETIR IADAIRAVDS KTAPGLMEGW 300 DKTLKGFEEI GMVVGFLRVR IRKLIRVFRE YRAGIELKRI ERDEAEEERI ALNVKLWRVE 360 NWIGEIDAEI DALSAKNESM GPVLKEIACA PW* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.N01192.3.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012831053.1 | 0.0 | PREDICTED: B3 domain-containing protein Os01g0234100-like isoform X2 | ||||
TrEMBL | A0A022RRP6 | 0.0 | A0A022RRP6_ERYGU; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19184.1 | 6e-26 | B3 family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.N01192.3.p |