PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N01192.1.p
Common NameMIMGU_mgv1a007604mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family B3
Protein Properties Length: 415aa    MW: 47845.9 Da    PI: 9.4305
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N01192.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B355.41.1e-1764154196
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                       f k +  s+v ++  l+lpk f+++h  k  ++ ++++ de+ +s+++++ +r  ++r+ lt+GW++F  a+ L egD++vF+l++  +f  +
  Migut.N01192.1.p  64 FAKPMQISHVARKFELTLPKLFCDAHLPK--KDGMIVFLDENDQSYNINYVVRV-RDRFDLTGGWRSFSTAHALLEGDVLVFQLIEPCKF--K 151
                       7899999*******************534..3449***************6555.5699*************************998888..6 PP

                       EEE CS
                B3  94 vkv 96 
                       v +
  Migut.N01192.1.p 152 VYI 154
                       655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019361.8E-2157156IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.101.0E-1957156IPR015300DNA-binding pseudobarrel domain
CDDcd100171.82E-2262156No hitNo description
PfamPF023622.8E-1564154IPR003340B3 DNA binding domain
PROSITE profilePS5086313.26764158IPR003340B3 DNA binding domain
SMARTSM010191.1E-1464158IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 415 aa     Download sequence    Send to blast
MRTAWELKKK PAEQRLMDLT NQKKKNGDSV STDRPYKRSF GLRSSAMNRA QTIQANLSPH  60
FPSFAKPMQI SHVARKFELT LPKLFCDAHL PKKDGMIVFL DENDQSYNIN YVVRVRDRFD  120
LTGGWRSFST AHALLEGDVL VFQLIEPCKF KVYIVKDTRL TKVDGPNRDR FHRKPIKAAK  180
TEPEEENSDP IERTRNKYLE RISQKTKTDR TTPIRKPARD EYASYSDSFG TERSLEYSLL  240
GFKDFKDFSI YIDGLTIDSE IPTDCKEKYY GLCKSRNMFL HENLVQGLNG KLAVEMISET  300
IRIADAIRAV DSKTAPGLME GWDKTLKGFE EIGMVVGFLR VRIRKLIRVF REYRAGIELK  360
RIERDEAEEE RIALNVKLWR VENWIGEIDA EIDALSAKNE SMGPVLKEIA CAPW*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N01192.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012831053.10.0PREDICTED: B3 domain-containing protein Os01g0234100-like isoform X2
TrEMBLA0A022RRP60.0A0A022RRP6_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30232343
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.17e-26B3 family protein