PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N00838.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family M-type_MADS
Protein Properties Length: 336aa    MW: 38835.1 Da    PI: 4.5194
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N00838.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF31.72e-101251443
                      -SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT CS
            SRF-TF  4 enksnrqvtfskRrngilKKAeELSvLCdaevaviifsst 43
                       n+  r  +f kR+ g++ K + L +LCd+ +++iif  +
  Migut.N00838.1.p 12 RNEKSRRLSFKKRKDGLINKLHQLTTLCDVTACMIIFDDN 51
                      5888999*****************************9765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF554557.19E-17174IPR002100Transcription factor, MADS-box
PROSITE profilePS5006617.913156IPR002100Transcription factor, MADS-box
SMARTSM004321.5E-13162IPR002100Transcription factor, MADS-box
CDDcd002667.20E-17277No hitNo description
PRINTSPR004046.9E-10323IPR002100Transcription factor, MADS-box
PfamPF003191.4E-121252IPR002100Transcription factor, MADS-box
PRINTSPR004046.9E-102338IPR002100Transcription factor, MADS-box
PRINTSPR004046.9E-103859IPR002100Transcription factor, MADS-box
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    Send to blast
MGRGKLKLEL MRNEKSRRLS FKKRKDGLIN KLHQLTTLCD VTACMIIFDD NSNYQEPDIW  60
PRDPEKVRRI VESYDSPKSV STFGLSDFFR DRTKTVEDEL KKLRKSNLES KFPIRHEFLD  120
SLTESQLREF GDALKNKARI AKSRIDFLKN QESTMKQEFS SMDFGNLDRN QETASSSSSV  180
NQNNSVVMMD FAHAPKRFGL DPPHEDFCTW NNIHDDQETD FASNNNHQNN SVVMMMDFDP  240
EILGFDPARD LSAWDFDEQE IDSCLKEISD DATNFDDRHY CGPSSDIMIP QHYYTAAAPV  300
VVEDVVLPPQ LQYWENDGGD QEEDILQFFD GSFWS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N00838.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012842298.10.0PREDICTED: floral homeotic protein GLOBOSA-like
TrEMBLA0A022R0Z20.0A0A022R0Z2_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24572253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31630.14e-19AGAMOUS-like 86